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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Gene Name = "CG6998"

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Search Summary

This query matches 17 Structures.

Refinements

Structure Determination Methodology

experimental (17)

Scientific Name of Source Organism

	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (9)
	Xylella fastidiosa 9a5c (4)
	Aquifex aeolicus VF5 (1)
	Brucella abortus S19 (1)
	Coxiella burnetii (1)
	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20130345 (1)

Taxonomy

Bacteria (17)

Experimental Method

X-RAY DIFFRACTION (17)

Polymer Entity Type

Protein (17)

Refinement Resolution (Å)

	1.5 - 2.0 (8)
	2.0 - 2.5 (5)
	2.5 - 3.0 (3)
	3.5 - 4.0 (1)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (3)
	2015 - 2019 (13)

Enzyme Classification Name

Hydrolases (17)

Symmetry Type

	Cyclic (12)
	Dihedral (5)

SCOP Classification

	Alpha and beta proteins (a/b) (16)
	Artifacts (9)

AllSelected

1 to 17 of 17 Structures

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2WQK \| pdb_00002wqk	Download File View File

Crystal Structure of Sure Protein from Aquifex aeolicus

Antonyuk, S.V., Ellis, M.J., Strange, R.W., Hasnain, S.S., Bessho, Y., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

(2009) Acta Crystallogr Sect F Struct Biol Cryst Commun 65: 1204

Released	2009-09-29
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Aquifex aeolicus VF5
Macromolecule	5'-NUCLEOTIDASE SURE (protein)
Unique Ligands	NA, SO4

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3TY2 \| pdb_00003ty2	Download File View File

Structure of a 5'-nucleotidase (surE) from Coxiella burnetii

Cheung, J., Franklin, M.C., Rudolph, M., Cassidy, M., Gary, E., Burshteyn, F., Love, J.

(2015) Proteins 83: 2124-2136

Released	2011-10-19
Method	X-RAY DIFFRACTION 1.885 Å
Organisms	Coxiella burnetii
Macromolecule	5'-nucleotidase surE (protein)
Unique Ligands	TRS

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4G9O \| pdb_00004g9o	Download File View File

Crystal Structure of H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

Mathiharan, Y.K., Murthy, M.R.N.

(2013) PLoS One 8: e55978-e55978

Released	2013-03-13
Method	X-RAY DIFFRACTION 2.12 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Macromolecule	5'/3'-nucleotidase SurE (protein)
Unique Ligands	EDO, MG

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4GAD \| pdb_00004gad	Download File View File

Crystal Structure of D230A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

Mathiharan, Y.K., Murthy, M.R.N.

(2013) PLoS One 8: e55978-e55978

Released	2013-03-13
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Macromolecule	5'/3'-nucleotidase SurE (protein)
Unique Ligands	GOL, MG

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4RYT \| pdb_00004ryt	Download File View File

Crystal Structure of F222 form of E112A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

Mathiharan, Y.K., Murthy, M.R.N.

(2015) Acta Crystallogr D Biol Crystallogr 71: 1812-1823

Released	2015-09-09
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Macromolecule	5'/3'-nucleotidase SurE (protein)
Unique Ligands	EDO, MG, PO4

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4RYU \| pdb_00004ryu	Download File View File

Crystal Structure of C2 form of E112A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

Mathiharan, Y.K., Murthy, M.R.N.

(2015) Acta Crystallogr D Biol Crystallogr 71: 1812-1823

Released	2015-09-09
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Salmonella enterica subsp. enterica serovar Enteritidis str. EC20130345
Macromolecule	5'/3'-nucleotidase SurE (protein)
Unique Ligands	GOL, MG, MPD, PO4

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4XEP \| pdb_00004xep	Download File View File

Crystal Structure of F222 form of E112A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

Mathiharan, Y.K., Murthy, M.R.N.

(2015) Acta Crystallogr D Biol Crystallogr 71: 1812-1823

Released	2015-09-09
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Macromolecule	5'/3'-nucleotidase SurE (protein)
Unique Ligands	EDO, MG, PO4

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4XER \| pdb_00004xer	Download File View File

Crystal Structure of C2 form of E112A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

Mathiharan, Y.K., Murthy, M.R.N.

(2015) Acta Crystallogr D Biol Crystallogr 71: 1812-1823

Released	2015-09-09
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Macromolecule	5'/3'-nucleotidase SurE (protein)
Unique Ligands	ACT, CA, MG, MPD, PO4

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4XGB \| pdb_00004xgb	Download File View File

Crystal Structure of E112A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium co-crystallized with AMP

Mathiharan, Y.K., Murthy, M.R.N.

(2015) Acta Crystallogr D Biol Crystallogr 71: 1812-1823

Released	2015-09-09
Method	X-RAY DIFFRACTION 2.23 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Macromolecule	5'/3'-nucleotidase SurE (protein)
Unique Ligands	MG, MPD, PO4

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4XGP \| pdb_00004xgp	Download File View File

Crystal Structure of E112A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium co-crystallized and soaked with AMP.

Mathiharan, Y.K., Murthy, M.R.N.

(2015) Acta Crystallogr D Biol Crystallogr 71: 1812-1823

Released	2015-09-09
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Macromolecule	5'/3'-nucleotidase SurE (protein)
Unique Ligands	ADE, EDO, MG, PO4

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4XH8 \| pdb_00004xh8	Download File View File

Crystal Structure of E112A/D230A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

Mathiharan, Y.K., Murthy, M.R.N.

(2015) Acta Crystallogr D Biol Crystallogr 71: 1812-1823

Released	2015-09-09
Method	X-RAY DIFFRACTION 3.56 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Macromolecule	5'/3'-nucleotidase SurE (protein)

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4XJ7 \| pdb_00004xj7	Download File View File

Crystal Structure of E112A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium soaked with AMP

Mathiharan, Y.K., Murthy, M.R.N.

(2015) Acta Crystallogr D Biol Crystallogr 71: 1812-1823

Released	2015-09-09
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Macromolecule	5'/3'-nucleotidase SurE (protein)
Unique Ligands	ADE, ADN, GOL, MG, PO4

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4ZG5 \| pdb_00004zg5	Download File View File

Structural and functional insights into Survival endonuclease, an important virulence factor of Brucella abortus

Tarique, K.F., Abdul Rehman, S.A., Devi, S., Gourinath, S.

(2016) Acta Crystallogr F Struct Biol Commun 72: 386-396

Released	2015-05-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Brucella abortus S19
Macromolecule	5'-nucleotidase SurE (protein)
Unique Ligands	MG

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5KSQ \| pdb_00005ksq	Download File View File

Stationary phase survival protein E (SurE) from Xylella fastidiosa

Machado, A.T.P., Fonseca, E.M.B., Dos Reis, M.A., Saraiva, A.M., Dos Santos, C.A., De Toledo, M.A., Polikarpov, I., De Souza, A.P., Aparicio, R., Iulek, J.

(2017) Proteins 85: 1931-1943

Released	2017-07-19
Method	X-RAY DIFFRACTION 2.63 Å
Organisms	Xylella fastidiosa 9a5c
Macromolecule	5'-nucleotidase SurE (protein)
Unique Ligands	IOD, MN, PO4

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5KSR \| pdb_00005ksr	Download File View File

Stationary phase survival protein E (SurE) from Xylella fastidiosa - XFSurE-TB (Tetramer Bigger).

Machado, A.T.P., Fonseca, E.M.B., Dos Reis, M.A., Saraiva, A.M., Dos Santos, C.A., De Toledo, M.A., Polikarpov, I., De Souza, A.P., De Aparicio, R., Iulek, J.

(2017) Proteins 85: 1931-1943

Released	2017-07-19
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Xylella fastidiosa 9a5c
Macromolecule	5'-nucleotidase SurE (protein)
Unique Ligands	CL, IOD, MN

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5KSS \| pdb_00005kss	Download File View File

Stationary phase survival protein E (SurE) from Xylella fastidiosa - XFSurE-Ds (Dimer Smaller)

Machado, A.T.P., Fonseca, E.M.B., Dos Reis, M.A., Saraiva, A.M., Dos Santos, C.A., De Toledo, A.M.S., Polikarpov, I., De Souza, A.P., Aparicio, R., Iulek, J.

(2017) Proteins 85: 1931-1943

Released	2017-07-19
Method	X-RAY DIFFRACTION 2.82 Å
Organisms	Xylella fastidiosa 9a5c
Macromolecule	5'-nucleotidase SurE (protein)
Unique Ligands	CL, IOD, MN

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5KST \| pdb_00005kst	Download File View File

Stationary phase Survival protein E (SurE) from Xylella fastidiosa- XfSurE-TSAmp (Tetramer Smaller - crystallization with 3'AMP).

Machado, A.T.P., Fonseca, E.M.B., Dos Reis, M.A., Saraiva, A.M., Dos Santos, C.A., De Toledo, M.A.S., Polikarpov, I., De Souza, A.P., Aparicio, R., Iulek, J.

(2017) Proteins 85: 1931-1943

Released	2017-07-19
Method	X-RAY DIFFRACTION 2.759 Å
Organisms	Xylella fastidiosa 9a5c
Macromolecule	5'-nucleotidase SurE (protein)
Unique Ligands	IOD, MN, PO4

1 to 17 of 17 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2WQK | pdb_00002wqk

Crystal Structure of Sure Protein from Aquifex aeolicus

3TY2 | pdb_00003ty2

Structure of a 5'-nucleotidase (surE) from Coxiella burnetii

4G9O | pdb_00004g9o

Crystal Structure of H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

4GAD | pdb_00004gad

Crystal Structure of D230A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

4RYT | pdb_00004ryt

Crystal Structure of F222 form of E112A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

4RYU | pdb_00004ryu

Crystal Structure of C2 form of E112A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

4XEP | pdb_00004xep

Crystal Structure of F222 form of E112A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

4XER | pdb_00004xer

Crystal Structure of C2 form of E112A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

4XGB | pdb_00004xgb

Crystal Structure of E112A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium co-crystallized with AMP

4XGP | pdb_00004xgp

Crystal Structure of E112A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium co-crystallized and soaked with AMP.

4XH8 | pdb_00004xh8

Crystal Structure of E112A/D230A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium

4XJ7 | pdb_00004xj7

Crystal Structure of E112A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium soaked with AMP

4ZG5 | pdb_00004zg5

Structural and functional insights into Survival endonuclease, an important virulence factor of Brucella abortus

5KSQ | pdb_00005ksq

Stationary phase survival protein E (SurE) from Xylella fastidiosa

5KSR | pdb_00005ksr

Stationary phase survival protein E (SurE) from Xylella fastidiosa - XFSurE-TB (Tetramer Bigger).

5KSS | pdb_00005kss

Stationary phase survival protein E (SurE) from Xylella fastidiosa - XFSurE-Ds (Dimer Smaller)

5KST | pdb_00005kst

Stationary phase Survival protein E (SurE) from Xylella fastidiosa- XfSurE-TSAmp (Tetramer Smaller - crystallization with 3'AMP).

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2WQK | pdb_00002wqk

3TY2 | pdb_00003ty2

4G9O | pdb_00004g9o

4GAD | pdb_00004gad

4RYT | pdb_00004ryt

4RYU | pdb_00004ryu

4XEP | pdb_00004xep

4XER | pdb_00004xer

4XGB | pdb_00004xgb

4XGP | pdb_00004xgp

4XH8 | pdb_00004xh8

4XJ7 | pdb_00004xj7

4ZG5 | pdb_00004zg5

5KSQ | pdb_00005ksq

5KSR | pdb_00005ksr

5KSS | pdb_00005kss

5KST | pdb_00005kst