2JYI | pdb_00002jyi

Solution structure of MLL CXXC domain

• PDB DOI: https://doi.org/10.2210/pdb2JYI/pdb

• Classification: TRANSCRIPTION
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2007-12-13 Released: 2008-12-09 
• Deposition Author(s): Cierpicki, T., Bushweller, J.H.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 14 
• Selection Criteria: structures with the lowest energy 

Literature

Structural basis for maintenance of unmethylated CpG elements by the CXXC domain of MLL and its critical contributions to MLL-AF9 immortalization activity

Cierpicki, T., Riesbeck, L.E., Grembecka, J., Lukasik, S.M., Omonkowska, M., Shultis, D., Zeleznik-Le, N.J., Bushweller, J.H.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 6.66 kDa 
• Atom Count: 448 
• Modelled Residue Count: 57 
• Deposited Residue Count: 57 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Zinc finger protein HRX	A	57	Homo sapiens	Mutation(s): 0  Gene Names: MLL, ALL1, HRX, HTRX, TRX1 EC: 2.1.1.364 (UniProt), 2.1.1 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for Q03164 (Homo sapiens) Explore Q03164  Go to UniProtKB:  Q03164
PHAROS:  Q03164 GTEx:  ENSG00000118058

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A], C [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 14 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2008-12-09 
Deposition Author(s): Cierpicki, T., Bushweller, J.H.

Revision History  

• Version 1.0: 2008-12-09
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2022-03-16
  Changes: Data collection, Database references, Derived calculations
• Version 1.3: 2024-05-29
  Changes: Data collection