2LE9 | pdb_00002le9

RAGEC2-S100A13 tetrameric complex

• PDB DOI: https://doi.org/10.2210/pdb2LE9/pdb
• BMRB: 17704

• Classification: MEMBRANE PROTEIN/METAL BINDING PROTEIN
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2011-06-14 Released: 2012-06-27 
• Deposition Author(s): Rani, S.G., Mohan, S.K., Yu, C.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 4000 
• Conformers Submitted: 1 
• Selection Criteria: structures with the lowest energy 

Literature

Interaction of S100A13 with Receptor for Advanced Glycation End products (RAGE) C2 domain

Rani, S.G., Mohan, S.K., Yu, C.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 4-mer - A2B2 

Local Symmetry: Cyclic - C2  (Explore in 3D)
Local Stoichiometry: Homo 2-mer - A2 Local Symmetry: Cyclic - C2  (Explore in 3D)
Local Stoichiometry: Homo 2-mer - B2 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 42.01 kDa 
• Atom Count: 2,952 
• Modelled Residue Count: 380 
• Deposited Residue Count: 380 
• Unique protein chains: 2

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Advanced glycosylation end product-specific receptor	A, D	93	Homo sapiens	Mutation(s): 0  Gene Names: AGER, RAGE, RAGEC2
UniProt & NIH Common Fund Data Resources
Find proteins for Q15109 (Homo sapiens) Explore Q15109  Go to UniProtKB:  Q15109
PHAROS:  Q15109 GTEx:  ENSG00000204305

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Protein S100-A13	B, C	97	Homo sapiens	Mutation(s): 0  Gene Names: S100A13
UniProt & NIH Common Fund Data Resources
Find proteins for Q99584 (Homo sapiens) Explore Q99584  Go to UniProtKB:  Q99584
GTEx:  ENSG00000189171

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 4000 
• Conformers Submitted: 1 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2012-06-27 
Deposition Author(s): Rani, S.G., Mohan, S.K., Yu, C.

Revision History  

• Version 1.0: 2012-06-27
  Type: Initial release
  
• Version 1.1: 2023-06-14
  Changes: Data collection, Database references, Other
• Version 1.2: 2024-10-09
  Changes: Data collection, Database references, Structure summary