Macromolecule Content

Total Structure Weight: 224.56 kDa
Atom Count: 12,234
Modelled Residue Count: 1,581
Deposited Residue Count: 2,064
Unique protein chains: 1

7ZLV

Tail tip of siphophage T5 : central fibre protein pb4

PDB DOI: 10.2210/pdb7ZLV/pdb
EM Map EMD-14790: EMDB EMDataResource

Classification: VIRUS LIKE PARTICLE
Organism(s): Escherichia phage T5
Mutation(s): No

Deposited: 2022-04-15 Released: 2023-02-08
Deposition Author(s): Linares, R., Arnaud, C.A., Effantin, G., Epalle, N., Boeri Erba, E., Schoehn, G., Breyton, C.
Funding Organization(s): Agence Nationale de la Recherche (ANR)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.22 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Structure of bacteriophage T5 tail tip complex and its drastic rearrangement upon interaction with its bacterial receptor

Linares, R., Arnaud, C.A., Effantin, G., Epalle, N., Boeri Erba, E., Schoehn, G., Breyton, C.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Probable central straight fiber	B [auth h], A [auth i], C [auth j]	688	Escherichia phage T5	Mutation(s): 0 Gene Names: D17, ORF126, T5.137, T5p133
UniProt
Find proteins for Q6QGF0 (Escherichia phage T5) Explore Q6QGF0 Go to UniProtKB: Q6QGF0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q6QGF0
Protein Feature View Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 4.22 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
RECONSTRUCTION	RELION	3.0/3.1
MODEL REFINEMENT	PHENIX
MODEL REFINEMENT	Coot

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-02-08

Deposition Author(s):

Funding Organization	Location	Grant Number
Agence Nationale de la Recherche (ANR)	France	ANR-16-CE11-0027
Agence Nationale de la Recherche (ANR)	France	ANR-21-CE11-0023

Revision History (Full details and data files)

Version 1.0: 2023-02-08
Type: Initial release

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.