Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1z9ea1 All alpha proteins N-cbl like HIV integrase-binding domain HIV integrase-binding domain PC4 and SFRS1-interacting protein, PSIP1 human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyHIV integrase-binding domain 8023059 4001336 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyHIV integrase-binding domain 8035439 3001321 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALEDGFe1z9eA1 A: alpha bundlesX: N-cbl likeH: Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 (From Topology)T: Conserved domain common to transcription factors TFIIS, elongin A, CRSP70F: LEDGFECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.930.10 Mainly Alpha Up-down Bundle Transcription Elongation Factor S-II Chain ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF11467Lens epithelium-derived growth factor (LEDGF) (LEDGF)Lens epithelium-derived growth factor (LEDGF)LEDGF is a chromatin-associated protein that protects cells from stress-induced apoptosis. It is the binding partner of HIV-1 integrase in human cells. The integrase binding domain (IBD) of LEDGF is a compact right-handed bundle composed of five alph ...LEDGF is a chromatin-associated protein that protects cells from stress-induced apoptosis. It is the binding partner of HIV-1 integrase in human cells. The integrase binding domain (IBD) of LEDGF is a compact right-handed bundle composed of five alpha-helices. The residues essential for the interaction with the integrase are present in the inter-helical loop regions of the bundle structure [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
PC4 and SFRS1 interacting protein 2