Crystal Structure of the Putative N-acetylglucosamine Kinase (PG1100) from Porphyromonas gingivalis, Northeast Structural Genomics Target PgR18
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d1zbsa1 | Alpha and beta proteins (a/b) | Ribonuclease H-like motif | Actin-like ATPase domain | BadF/BadG/BcrA/BcrD-like | Hypothetical protein PG1100, C-terminal domain | (Porphyromonas gingivalis W83 ) [TaxId: 242619 ], | SCOPe (2.08) |
| A | d1zbsa2 | Alpha and beta proteins (a/b) | Ribonuclease H-like motif | Actin-like ATPase domain | BadF/BadG/BcrA/BcrD-like | Hypothetical protein PG1100, N-terminal domain | (Porphyromonas gingivalis W83 ) [TaxId: 242619 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | BadF/BadG/BcrA/BcrD-like | 8023168 | 4003392 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Actin-like ATPases | 8035546 | 3000092 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Actin-like ATPases | 8035548 | 3000092 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | BcrAD_BadFG_N | e1zbsA2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: BcrAD_BadFG_N | ECOD (1.6) |
| A | BcrAD_BadFG_C | e1zbsA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: BcrAD_BadFG_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.30.420.40 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
| A | 1.10.720.160 | Mainly Alpha | Orthogonal Bundle | Transcription Termination Factor Rho, Rna-binding Domain | Chain A, Domain 1 | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR043129 | ATPase, nucleotide binding domain | Homologous Superfamily | |
| IPR052519 | Eukaryotic-type N-acetylglucosamine Kinase | Family |
