2IJG
Crystal Structure of cryptochrome 3 from Arabidopsis thaliana
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | FAD_binding_7 | e2ijgX5 | A: alpha complex topology | X: Cryptochrome/photolyase FAD-binding domain-related (From Homology) | H: Cryptochrome/photolyase FAD-binding domain-related | T: Cryptochrome/photolyase FAD-binding domain | F: FAD_binding_7 | ECOD (1.6) |
A [auth X] | DNA_photolyase | e2ijgX6 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: DNA_photolyase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth X] | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
A [auth X] | 1.25.40.80 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | CATH (4.3.0) | |
A [auth X] | 1.10.579.10 | Mainly Alpha | Orthogonal Bundle | DNA Cyclobutane Dipyrimidine Photolyase, subunit A | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth X] | PF00875 | DNA photolyase (DNA_photolyase) | DNA photolyase | This domain binds a light harvesting cofactor. | Domain |
A [auth X] | PF03441 | FAD binding domain of DNA photolyase (FAD_binding_7) | FAD binding domain of DNA photolyase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth X] | IPR014133 | Cryptochrome DASH | Family |
A [auth X] | IPR002081 | Cryptochrome/DNA photolyase class 1 | Family |
A [auth X] | IPR036134 | Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily | Homologous Superfamily |
A [auth X] | IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | Homologous Superfamily |
A [auth X] | IPR036155 | Cryptochrome/photolyase, N-terminal domain superfamily | Homologous Superfamily |
A [auth X] | IPR006050 | DNA photolyase, N-terminal | Domain |
A [auth X] | IPR005101 | Cryptochrome/DNA photolyase, FAD-binding domain | Domain |