2SBL
THE THREE-DIMENSIONAL STRUCTURE OF AN ARACHIDONIC ACID 15-LIPOXYGENASE
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d2sblb1 | All alpha proteins | Lipoxigenase | Lipoxigenase | Plant lipoxigenases | Lipoxigenase, C-terminal domain | soybean (Glycine max ) [TaxId: 3847 ], | SCOPe (2.08) |
A [auth B] | d2sblb2 | All beta proteins | Lipase/lipooxygenase domain (PLAT/LH2 domain) | Lipase/lipooxygenase domain (PLAT/LH2 domain) | Lipoxigenase N-terminal domain | Plant lipoxigenase | soybean (Glycine max ) [TaxId: 3847 ], | SCOPe (2.08) |
B [auth A] | d2sbla1 | All alpha proteins | Lipoxigenase | Lipoxigenase | Plant lipoxigenases | Lipoxigenase, C-terminal domain | soybean (Glycine max ) [TaxId: 3847 ], | SCOPe (2.08) |
B [auth A] | d2sbla2 | All beta proteins | Lipase/lipooxygenase domain (PLAT/LH2 domain) | Lipase/lipooxygenase domain (PLAT/LH2 domain) | Lipoxigenase N-terminal domain | Plant lipoxigenase | soybean (Glycine max ) [TaxId: 3847 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 8041074 | 3001168 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | Lipoxygenase | 8038668 | 3001410 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 8041074 | 3001168 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | Lipoxygenase | 8038668 | 3001410 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PLAT | e2sblB1 | A: beta sandwiches | X: jelly-roll | H: Lipase/lipooxygenase domain (PLAT/LH2 domain) (From Topology) | T: Lipase/lipooxygenase domain (PLAT/LH2 domain) | F: PLAT | ECOD (1.6) |
A [auth B] | Lipoxygenase | e2sblB2 | A: alpha bundles | X: Lipoxygenase (From Topology) | H: Lipoxygenase (From Topology) | T: Lipoxygenase | F: Lipoxygenase | ECOD (1.6) |
B [auth A] | PLAT | e2sblA1 | A: beta sandwiches | X: jelly-roll | H: Lipase/lipooxygenase domain (PLAT/LH2 domain) (From Topology) | T: Lipase/lipooxygenase domain (PLAT/LH2 domain) | F: PLAT | ECOD (1.6) |
B [auth A] | Lipoxygenase | e2sblA2 | A: alpha bundles | X: Lipoxygenase (From Topology) | H: Lipoxygenase (From Topology) | T: Lipoxygenase | F: Lipoxygenase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 2.60.60.20 | Mainly Beta | Sandwich | Lipoxygenase-1 | PLAT/LH2 domain | CATH (4.3.0) |
A [auth B] | 4.10.375.10 | Few Secondary Structures | Irregular | Lipoxygenase-1 | domain 2 | CATH (4.3.0) |
A [auth B] | 4.10.372.10 | Few Secondary Structures | Irregular | Lipoxygenase-1 | domain 3 | CATH (4.3.0) |
A [auth B] | 3.10.450.60 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
A [auth B] | 1.20.245.10 | Mainly Alpha | Up-down Bundle | Lipoxygenase-1 | domain 5 | CATH (4.3.0) |
B [auth A] | 2.60.60.20 | Mainly Beta | Sandwich | Lipoxygenase-1 | PLAT/LH2 domain | CATH (4.3.0) |
B [auth A] | 4.10.375.10 | Few Secondary Structures | Irregular | Lipoxygenase-1 | domain 2 | CATH (4.3.0) |
B [auth A] | 4.10.372.10 | Few Secondary Structures | Irregular | Lipoxygenase-1 | domain 3 | CATH (4.3.0) |
B [auth A] | 3.10.450.60 | Alpha Beta | Roll | Nuclear Transport Factor 2 | Chain: A, | CATH (4.3.0) |
B [auth A] | 1.20.245.10 | Mainly Alpha | Up-down Bundle | Lipoxygenase-1 | domain 5 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF00305 | Lipoxygenase (Lipoxygenase) | Lipoxygenase | - | Domain |
A [auth B], B [auth A] | PF01477 | PLAT/LH2 domain (PLAT) | PLAT/LH2 domain | This domain is found in a variety of membrane or lipid associated proteins. It is called the PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology) domain. The known structure of pancreatic lipase shows this domain bind ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR020834 | Lipoxygenase, conserved site | Conserved Site |
A [auth B], B [auth A] | IPR036392 | PLAT/LH2 domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR027433 | Lipoxygenase, domain 3 | Homologous Superfamily |
A [auth B], B [auth A] | IPR001024 | PLAT/LH2 domain | Domain |
A [auth B], B [auth A] | IPR036226 | Lipoxigenase, C-terminal domain superfamily | Homologous Superfamily |
A [auth B], B [auth A] | IPR001246 | Lipoxygenase, plant | Family |
A [auth B], B [auth A] | IPR042057 | Plant lipoxygenase, PLAT/LH2 domain | Domain |
A [auth B], B [auth A] | IPR000907 | Lipoxygenase | Family |
A [auth B], B [auth A] | IPR020833 | Lipoxygenase, iron binding site | Binding Site |
A [auth B], B [auth A] | IPR013819 | Lipoxygenase, C-terminal | Domain |