Molecular basis of human XPC gene recognition and cleavage by engineered homing endonuclease heterodimers
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2vbja_ | Alpha and beta proteins (a+b) | Homing endonuclease-like | Homing endonucleases | Group I mobile intron endonuclease | automated matches | (Chlamydomonas reinhardtii ) [TaxId: 3055 ], | SCOPe (2.08) |
B | d2vbjb_ | Alpha and beta proteins (a+b) | Homing endonuclease-like | Homing endonucleases | Group I mobile intron endonuclease | automated matches | (Chlamydomonas reinhardtii ) [TaxId: 3055 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | LAGLIDADG_1 | e2vbjA1 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: LAGLIDADG_1 | ECOD (1.6) |
B | LAGLIDADG_1 | e2vbjB1 | A: a+b two layers | X: Homing endonucleases-like | H: Homing endonucleases (From Topology) | T: Homing endonucleases | F: LAGLIDADG_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
B | 3.10.28.10 | Alpha Beta | Roll | Endonuclease I-creI | Homing endonucleases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00961 | LAGLIDADG endonuclease (LAGLIDADG_1) | LAGLIDADG endonuclease | Domain | ||
PF00961 | LAGLIDADG endonuclease (LAGLIDADG_1) | LAGLIDADG endonuclease | Domain | ||
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
DNA ENDONUCLEASE I-CREI | ||||
DNA ENDONUCLEASE I-CREI | ||||
5'-D(*TP*CP*TP*GP*CP*CP*TP*TP*TP*TP *TP*TP*GP*AP*AP*GP*GP*AP*TP*CP*CP*TP*AP*A)-3' | - | - | - | |
D [auth E] | 5'-D(*TP*TP*AP*GP*GP*AP*TP*CP*CP*TP *TP*CP*AP*AP*AP*AP*AP*AP*GP*GP*CP*AP*GP*A)-3' | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004860 | Homing endonuclease, LAGLIDADG domain | Domain | |
IPR027434 | Homing endonuclease | Homologous Superfamily | |
IPR004860 | Homing endonuclease, LAGLIDADG domain | Domain | |
IPR027434 | Homing endonuclease | Homologous Superfamily |