2Y8K
Structure of CtGH5-CBM6, an arabinoxylan-specific xylanase.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | CBM_6 | e2y8kA4 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: CBM_6 | ECOD (1.6) |
A | Cellulase | e2y8kA3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Cellulase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
A | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00150 | Cellulase (glycosyl hydrolase family 5) (Cellulase) | Cellulase (glycosyl hydrolase family 5) | - | Domain | |
PF03422 | Carbohydrate binding module (family 6) (CBM_6) | Carbohydrate binding module (family 6) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002105 | Dockerin type I repeat | Repeat | |
IPR016134 | Dockerin domain | Domain | |
IPR006584 | Cellulose binding, type IV | Domain | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR003961 | Fibronectin type III | Domain | |
IPR001547 | Glycoside hydrolase, family 5 | Domain | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
IPR005084 | Carbohydrate binding module family 6 | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR035992 | Ricin B-like lectins | Homologous Superfamily | |
IPR036439 | Dockerin domain superfamily | Homologous Superfamily | |
IPR018087 | Glycoside hydrolase, family 5, conserved site | Conserved Site | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily | |
IPR000772 | Ricin B, lectin domain | Domain |