Crystal structure of PulA from Klebsiella oxytoca
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | pullul_strch_1st | e2yocA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: pullul_strch_1st | ECOD (1.6) |
| A | CBM_48 | e2yocA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: CBM_48 | ECOD (1.6) |
| A | PUD_1 | e2yocA3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PUD_1 | ECOD (1.6) |
| A | DUF3372 | e2yocA8 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: DUF3372 | ECOD (1.6) |
| A | pullul_strch_2nd | e2yocA7 | A: alpha arrays | X: SP0561-like (From Topology) | H: SP0561-like (From Topology) | T: SP0561-like | F: pullul_strch_2nd | ECOD (1.6) |
| A | Alpha-amylase | e2yocA9 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Alpha-amylase | ECOD (1.6) |
| B | pullul_strch_1st | e2yocB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: pullul_strch_1st | ECOD (1.6) |
| B | CBM_48 | e2yocB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: CBM_48 | ECOD (1.6) |
| B | PUD_1 | e2yocB3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: PUD_1 | ECOD (1.6) |
| B | DUF3372 | e2yocB8 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycosyl hydrolase domain (From Topology) | T: Glycosyl hydrolase domain | F: DUF3372 | ECOD (1.6) |
| B | pullul_strch_2nd | e2yocB7 | A: alpha arrays | X: SP0561-like (From Topology) | H: SP0561-like (From Topology) | T: SP0561-like | F: pullul_strch_2nd | ECOD (1.6) |
| B | Alpha-amylase | e2yocB9 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Alpha-amylase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.40.1110 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.2.0) | |
| A | 2.60.40.1130 | Mainly Beta | Sandwich | Immunoglobulin-like | Rab geranylgeranyltransferase alpha-subunit, insert domain | CATH (4.2.0) |
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.2.0) |
| A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.2.0) |
| A | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.2.0) |
| B | 2.60.40.1110 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.2.0) | |
| B | 2.60.40.1130 | Mainly Beta | Sandwich | Immunoglobulin-like | Rab geranylgeranyltransferase alpha-subunit, insert domain | CATH (4.2.0) |
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.2.0) |
| B | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.2.0) |
| B | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.2.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| PULLULANASE |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR013784 | Carbohydrate-binding-like fold | Homologous Superfamily | |
| IPR024561 | Alpha-1,6-glucosidases, pullulanase-type, C-terminal | Domain | |
| IPR040671 | Pullulanase, N2 domain | Domain | |
| IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
| IPR011839 | Alpha-1,6-glucosidases, pullulanase-type | Domain | |
| IPR041111 | Pullulanase, Ins domain | Domain | |
| IPR005323 | Pullulanase, carbohydrate-binding module 41 | Domain | |
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
| IPR006047 | Glycosyl hydrolase family 13, catalytic domain | Domain | |
| IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
| IPR004193 | Glycoside hydrolase, family 13, N-terminal | Domain |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | MONOTOPIC MEMBRANE PROTEINS | Hydrolases | PulA pullulanase |














