Crystal structure of sigma-54 interaction domain protein from Enterococcus faecalis
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | EIIA-man | e3gdwB1 | A: a/b three-layered sandwiches | X: EDD domain (From Topology) | H: EDD domain (From Topology) | T: EDD domain | F: EIIA-man | ECOD (1.6) |
| A | EIIA-man | e3gdwA1 | A: a/b three-layered sandwiches | X: EDD domain (From Topology) | H: EDD domain (From Topology) | T: EDD domain | F: EIIA-man | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.50.510 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Phosphotransferase system, mannose-type IIA component | CATH (4.3.0) |
| A | 3.40.50.510 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Phosphotransferase system, mannose-type IIA component | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF03610 | PTS system fructose IIA component (EIIA-man) | PTS system fructose IIA component | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036634 | PRD domain superfamily | Homologous Superfamily | |
| IPR004701 | Phosphotransferase system, mannose-type IIA component | Domain | |
| IPR002078 | RNA polymerase sigma factor 54 interaction domain | Domain | |
| IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
| IPR011608 | PRD domain | Domain | |
| IPR036662 | Phosphotransferase system, mannose-type IIA component superfamily | Homologous Superfamily | |
| IPR003593 | AAA+ ATPase domain | Domain | |
| IPR033887 | PTS system mannose/sorbose specific IIA subunit | Domain | |
| IPR025943 | Sigma-54 interaction domain, ATP-binding site 2 | Binding Site | |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |














