4DCZ | pdb_00004dcz

Crystal structure of a domain from a mycoplasma genitalium terminal organelle protein

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	EAGR_box-like	8053804	3002229	SCOP2B (2022-06-29)
A	SCOP2 Family	EAGR_box	8046022	4004830	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	EAGR_box-like	8053804	3002229	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	EAGR_box	e4dczB1	A: few secondary structure elements	X: EAGR box containing domain in MG200 (From Topology)	H: EAGR box containing domain in MG200 (From Topology)	T: EAGR box containing domain in MG200	F: EAGR_box	ECOD (1.6)
A	EAGR_box	e4dczA1	A: few secondary structure elements	X: EAGR box containing domain in MG200 (From Topology)	H: EAGR box containing domain in MG200 (From Topology)	T: EAGR box containing domain in MG200	F: EAGR_box	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.30.70.3600	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
A	3.30.70.3600	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF16713	Enriched in aromatic and glycine Residues box (EAGR_box)	Enriched in aromatic and glycine Residues box	The Enriched in Aromatic and Glycine Residues (EAGR) box is found in proteins from Mycoplasma, often tandemly repeated, and may have a role in cell motility [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	DnaJ-like protein MG200	unfolded protein binding protein binding binding	protein refolding primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein folding biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR022466	Enriched in aromatic and glycine residues box	Domain
A, B	IPR038145	EAGR domain superfamily	Homologous Superfamily
A, B	IPR001623	DnaJ domain	Domain
A, B	IPR018253	DnaJ domain, conserved site	Conserved Site
A, B	IPR002939	Chaperone DnaJ, C-terminal	Domain
A, B	IPR036869	Chaperone J-domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.