5WXK
EarP bound with domain I of EF-P
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UNK_F_TYPE | e5wxkA1 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: UNK_F_TYPE | ECOD (1.6) |
B | EFP_N | e5wxkB1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: EFP_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.30.30.30 | Mainly Beta | Roll | SH3 type barrels. | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF10093 | Elongation-Factor P (EF-P) rhamnosyltransferase EarP (EarP) | Elongation-Factor P (EF-P) rhamnosyltransferase EarP | - | Family | |
PF08207 | Elongation factor P (EF-P) KOW-like domain (EFP_N) | Elongation factor P (EF-P) KOW-like domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
EarP | - | - | ||
Elongation factor P |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016633 | Protein-arginine rhamnosyltransferase EarP | Family | |
IPR011768 | Translation elongation factor P | Family | |
IPR020599 | Translation elongation factor P/YeiP | Family | |
IPR015365 | Elongation factor P, C-terminal | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR013185 | Translation elongation factor, KOW-like | Domain | |
IPR014722 | Large ribosomal subunit protein uL2, domain 2 | Homologous Superfamily | |
IPR008991 | Translation protein SH3-like domain superfamily | Homologous Superfamily | |
IPR001059 | Translation elongation factor P/YeiP, central | Domain |