Crystallographic structure of the enzymatically active N-terminal domain of the Rel protein from Mycobacterium tuberculosis
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HD_4 | e5xnxA1 | A: alpha complex topology | X: PDEase-like | H: HD-domain/PDEase-like (From Topology) | T: HD-domain/PDEase-like | F: HD_4 | ECOD (1.6) |
A | RelA_SpoT | e5xnxA2 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: RelA_SpoT | ECOD (1.6) |
B | HD_4 | e5xnxB1 | A: alpha complex topology | X: PDEase-like | H: HD-domain/PDEase-like (From Topology) | T: HD-domain/PDEase-like | F: HD_4 | ECOD (1.6) |
B | RelA_SpoT | e5xnxB2 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: RelA_SpoT | ECOD (1.6) |
C | HD_4 | e5xnxC2 | A: alpha complex topology | X: PDEase-like | H: HD-domain/PDEase-like (From Topology) | T: HD-domain/PDEase-like | F: HD_4 | ECOD (1.6) |
C | RelA_SpoT | e5xnxC1 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: RelA_SpoT | ECOD (1.6) |
D | HD_4 | e5xnxD1 | A: alpha complex topology | X: PDEase-like | H: HD-domain/PDEase-like (From Topology) | T: HD-domain/PDEase-like | F: HD_4 | ECOD (1.6) |
D | RelA_SpoT | e5xnxD2 | A: a+b three layers | X: Nucleotidyltransferase-like | H: Nucleotidyltransferase (From Topology) | T: Nucleotidyltransferase | F: RelA_SpoT | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.3210.10 | Mainly Alpha | Orthogonal Bundle | Hypothetical protein af1432 | Hypothetical protein af1432 | CATH (4.3.0) |
A | 3.30.460.10 | Alpha Beta | 2-Layer Sandwich | Beta Polymerase | domain 2 | CATH (4.3.0) |
B | 1.10.3210.10 | Mainly Alpha | Orthogonal Bundle | Hypothetical protein af1432 | Hypothetical protein af1432 | CATH (4.3.0) |
B | 3.30.460.10 | Alpha Beta | 2-Layer Sandwich | Beta Polymerase | domain 2 | CATH (4.3.0) |
C | 1.10.3210.10 | Mainly Alpha | Orthogonal Bundle | Hypothetical protein af1432 | Hypothetical protein af1432 | CATH (4.3.0) |
C | 3.30.460.10 | Alpha Beta | 2-Layer Sandwich | Beta Polymerase | domain 2 | CATH (4.3.0) |
D | 1.10.3210.10 | Mainly Alpha | Orthogonal Bundle | Hypothetical protein af1432 | Hypothetical protein af1432 | CATH (4.3.0) |
D | 3.30.460.10 | Alpha Beta | 2-Layer Sandwich | Beta Polymerase | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003607 | HD/PDEase domain | Domain | |
IPR012676 | TGS-like | Homologous Superfamily | |
IPR004095 | TGS | Domain | |
IPR045865 | ACT-like domain | Homologous Superfamily | |
IPR002912 | ACT domain | Domain | |
IPR033655 | RelA/SpoT, TGS domain | Domain | |
IPR004811 | RelA/SpoT family | Family | |
IPR043519 | Nucleotidyltransferase superfamily | Homologous Superfamily | |
IPR007685 | RelA/SpoT | Domain | |
IPR012675 | Beta-grasp domain superfamily | Homologous Superfamily | |
IPR045600 | RelA/SpoT, AH and RIS domains | Domain | |
IPR006674 | HD domain | Domain |