6JG1
Crystal structure of barley exohydrolaseI wildtype in complex with 4I,4III,4V-S-trithiocellohexaose
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6jg1a1 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | NagZ-like | automated matches | Domesticated barley (Hordeum vulgare subsp. vulgare ) [TaxId: 112509 ], | SCOPe (2.08) |
A | d6jg1a2 | Alpha and beta proteins (a/b) | Flavodoxin-like | Beta-D-glucan exohydrolase, C-terminal domain-like | automated matches | automated matches | Domesticated barley (Hordeum vulgare subsp. vulgare ) [TaxId: 112509 ], | SCOPe (2.08) |
A | d6jg1a3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | Domesticated barley (Hordeum vulgare subsp. vulgare ) [TaxId: 112509 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Glyco_hydro_3 | e6jg1A2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_3 | ECOD (1.6) |
A | Glyco_hydro_3_C | e6jg1A1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Beta-D-glucan exohydrolase, C-terminal domain (From Topology) | T: Beta-D-glucan exohydrolase, C-terminal domain | F: Glyco_hydro_3_C | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00933 | Glycosyl hydrolase family 3 N terminal domain (Glyco_hydro_3) | Glycosyl hydrolase family 3 N terminal domain | - | Domain | |
PF01915 | Glycosyl hydrolase family 3 C-terminal domain (Glyco_hydro_3_C) | Glycosyl hydrolase family 3 C-terminal domain | This domain is involved in catalysis and may be involved in binding beta-glucan [1]. This domain is found associated with Pfam:PF00933. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Barley exohydrolase I |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001764 | Glycoside hydrolase, family 3, N-terminal | Domain | |
IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily | Homologous Superfamily | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR051915 | Cellulose Degradation Glycosyl Hydrolase 3 | Family | |
IPR036881 | Glycoside hydrolase family 3 C-terminal domain superfamily | Homologous Superfamily | |
IPR002772 | Glycoside hydrolase family 3 C-terminal domain | Domain |