6TGD
Crystal structure of NDM-1 in complex with triazole-based inhibitor OP31
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6tgda_ | Alpha and beta proteins (a+b) | Metallo-hydrolase/oxidoreductase | Metallo-hydrolase/oxidoreductase | automated matches | automated matches | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
B | d6tgdb_ | Alpha and beta proteins (a+b) | Metallo-hydrolase/oxidoreductase | Metallo-hydrolase/oxidoreductase | automated matches | automated matches | (Pseudomonas aeruginosa ) [TaxId: 287 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8098066 | 3001057 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Zn metallo-beta-lactamase | 8098065 | 4002289 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Metallo-hydrolase/oxidoreductase | 8098066 | 3001057 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Lactamase_B | e6tgdA1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
B | Lactamase_B | e6tgdB1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00753 | Metallo-beta-lactamase superfamily (Lactamase_B) | Metallo-beta-lactamase superfamily | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Metallo-beta-lactamase NDM-1 | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Homologous Superfamily | |
IPR001279 | Metallo-beta-lactamase | Domain | |
IPR050855 | Metallo-beta-lactamase type 2-like | Family |