6Z6N

Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
M [auth LJ]SCOP2B SuperfamilyRL5-like 8073892 3001709 SCOP2B (2022-06-29)
Z [auth LX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095967 3000210 SCOP2B (2022-06-29)
WA [auth SB]SCOP2B SuperfamilyRibosomal S3Ae-like 8053212 3002166 SCOP2B (2022-06-29)
HB [auth SS]SCOP2B SuperfamilyS13-like H2TH domain 8101555 3000053 SCOP2B (2022-06-29)
IB [auth ST]SCOP2B SuperfamilyWinged helix DNA-binding domain 8089318 3000034 SCOP2B (2022-06-29)
K [auth LH]SCOP2B SuperfamilyRibosomal protein L6 8033688 3000724 SCOP2B (2022-06-29)
L [auth LI]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8100400 3000884 SCOP2B (2022-06-29)
N [auth LL]SCOP2B SuperfamilyRibosomal protein L13e-like 8053155 3002162 SCOP2B (2022-06-29)
P [auth LN]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8098812 3000210 SCOP2B (2022-06-29)
R [auth LP]SCOP2B SuperfamilyRibosomal protein L22 8076704 3001078 SCOP2B (2022-06-29)
S [auth LQ]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8095977 3001045 SCOP2B (2022-06-29)
W [auth LU]SCOP2B Superfamily60S Ribosomal protein L22e 8053060 3002158 SCOP2B (2022-06-29)
X [auth LV]SCOP2B Superfamily50S Ribosomal protein L14-like 8072050 3000433 SCOP2B (2022-06-29)
AA [auth LY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076756 3000334 SCOP2B (2022-06-29)
BA [auth LZ]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053050 3000334 SCOP2B (2022-06-29)
CA [auth La]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8077123 3001045 SCOP2B (2022-06-29)
DA [auth Lb]SCOP2B SuperfamilyRibosomal protein L29e 8053036 3002157 SCOP2B (2022-06-29)
EA [auth Lc]SCOP2B SuperfamilyL30e-like 8077491 3001739 SCOP2B (2022-06-29)
HA [auth Lf]SCOP2B SuperfamilyTranslational proteins 8087455 3000811 SCOP2B (2022-06-29)
IA [auth Lg]SCOP2B SuperfamilyRibosomal protein L34e-like 8053540 3002203 SCOP2B (2022-06-29)
KA [auth Li]SCOP2B SuperfamilyRibosomal protein L36e 8053120 3002161 SCOP2B (2022-06-29)
MA [auth Lk]SCOP2B SuperfamilyRibosomal L38e protein-like 8053567 3002206 SCOP2B (2022-06-29)
NA [auth Ll]SCOP2B SuperfamilyRibosomal protein L39e 8095603 3001756 SCOP2B (2022-06-29)
RA [auth Lp]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101551 3001320 SCOP2B (2022-06-29)
TA [auth Lz]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like 8098870 3001911 SCOP2B (2022-06-29)
VA [auth SA]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8052791 3001397 SCOP2B (2022-06-29)
E [auth LB]SCOP2B SuperfamilyTranslational proteins 8078351 3000811 SCOP2B (2022-06-29)
XA [auth SD]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8043545 3001043 SCOP2B (2022-06-29)
YA [auth SE]SCOP2B SuperfamilyNucleic acid-binding proteins 8052756 3000135 SCOP2B (2022-06-29)
YA [auth SE]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052755 3001473 SCOP2B (2022-06-29)
YA [auth SE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052757 3000334 SCOP2B (2022-06-29)
ZA [auth SF]SCOP2B SuperfamilyRibosomal protein S7 8066003 3000799 SCOP2B (2022-06-29)
BB [auth SI]SCOP2B Superfamily50S Ribosomal protein L14-like 8053077 3000433 SCOP2B (2022-06-29)
CB [auth SK]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055714 3000034 SCOP2B (2022-06-29)
DB [auth SL]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052715 3002138 SCOP2B (2022-06-29)
DB [auth SL]SCOP2B SuperfamilyNucleic acid-binding proteins 8052717 3000135 SCOP2B (2022-06-29)
FB [auth SQ]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082685 3000100 SCOP2B (2022-06-29)
F [auth LC]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052831 3002143 SCOP2B (2022-06-29)
F [auth LC]SCOP2B SuperfamilyRibosomal protein L4 8052832 3001146 SCOP2B (2022-06-29)
JB [auth SU]SCOP2B SuperfamilyRibosomal protein S10 8098806 3001336 SCOP2B (2022-06-29)
KB [auth SV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053139 3000068 SCOP2B (2022-06-29)
MB [auth Sa]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053143 3000068 SCOP2B (2022-06-29)
NB [auth Sc]SCOP2B SuperfamilyNucleic acid-binding proteins 8063426 3000135 SCOP2B (2022-06-29)
OB [auth Sd]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052572 3000068 SCOP2B (2022-06-29)
G [auth LD]SCOP2B SuperfamilyTranslational machinery components 8052887 3000571 SCOP2B (2022-06-29)
RB [auth SG]SCOP2B SuperfamilyGS N-terminal domain-like 8053171 3000408 SCOP2B (2022-06-29)
TB [auth SM]SCOP2B SuperfamilyL30e-like 8063978 3001739 SCOP2B (2022-06-29)
UB [auth SN]SCOP2B SuperfamilyHomeodomain-like 8052958 3000001 SCOP2B (2022-06-29)
UB [auth SN]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052959 3001284 SCOP2B (2022-06-29)
VB [auth SO]SCOP2 FamilyRibosomal protein L18p and S11 8098843 4000555 SCOP2 (2022-06-29)
VB [auth SO]SCOP2 SuperfamilyTranslational machinery components 8098844 3000571 SCOP2 (2022-06-29)
WB [auth SW]SCOP2B SuperfamilyRibosomal protein S8 8095469 3000709 SCOP2B (2022-06-29)
YB [auth SZ]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090992 3000034 SCOP2B (2022-06-29)
AC [auth Se]SCOP2B SuperfamilyRibosomal protein S30e-like 8053453 3002190 SCOP2B (2022-06-29)
H [auth LE]SCOP2B SuperfamilyRibosomal protein L6e, N-terminal domain 8053099 3002160 SCOP2B (2022-06-29)
H [auth LE]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053100 3000334 SCOP2B (2022-06-29)
I [auth LF]SCOP2B SuperfamilyRibosomal L30p/L7e protein, N-terminal domain-lke 8052922 3002152 SCOP2B (2022-06-29)
I [auth LF]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8052923 3001378 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
M [auth LJ]Ribosomal_L5_Ce6z6nLJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
Z [auth LX]Ribosomal_L23_3e6z6nLX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
WA [auth SB]Ribosomal_S3Ae_Ne6z6nSB1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
WA [auth SB]Ribosomal_S3Ae_Ce6z6nSB2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
HB [auth SS]Ribosomal_S13e6z6nSS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
IB [auth ST]Ribosomal_S19ee6z6nST1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
J [auth LG]Ribosomal_L7Ae_1e6z6nLG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
K [auth LH]Ribosomal_L6_2e6z6nLH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
K [auth LH]Ribosomal_L6e6z6nLH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
L [auth LI]Ribosomal_L16e6z6nLI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
N [auth LL]Ribosomal_L13ee6z6nLL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
O [auth LM]Ribosomal_L14ee6z6nLM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
P [auth LN]Ribosomal_L15ee6z6nLN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
Q [auth LO]Ribosomal_L13e6z6nLO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
R [auth LP]Ribosomal_L22e6z6nLP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
S [auth LQ]Ribosomal_L18e6z6nLQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
T [auth LR]Ribosomal_L19e_Ne6z6nLR2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
T [auth LR]Ribosomal_L19e_Ce6z6nLR1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
U [auth LS]Ribosomal_L18Ae6z6nLS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
V [auth LT]Ribosomal_L21ee6z6nLT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
W [auth LU]Ribosomal_L22ee6z6nLU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
X [auth LV]Ribosomal_L14e6z6nLV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
Y [auth LW]Ribosomal_L24ee6z6nLW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
AA [auth LY]Ribosomal_L26e6z6nLY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
BA [auth LZ]Ribosomal_L27ee6z6nLZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
CA [auth La]Ribosomal_L18e6z6nLa1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
DA [auth Lb]Ribosomal_L29ee6z6nLb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
EA [auth Lc]Ribosomal_L7Aee6z6nLc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
FA [auth Ld]Ribosomal_L31ee6z6nLd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
GA [auth Le]Ribosomal_L32ee6z6nLe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
HA [auth Lf]Ribosomal_L35Aee6z6nLf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
IA [auth Lg]Ribosomal_L34ee6z6nLg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
JA [auth Lh]Ribosomal_L29_2e6z6nLh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
KA [auth Li]Ribosomal_L36ee6z6nLi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
LA [auth Lj]Ribosomal_L37ee6z6nLj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
MA [auth Lk]Ribosomal_L38ee6z6nLk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
D [auth LA]Ribosomal_L2_1e6z6nLA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
D [auth LA]Ribosomal_L2_C_2e6z6nLA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
NA [auth Ll]Ribosomal_L39e6z6nLl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
OA [auth Lm]Ribosomal_L40ee6z6nLm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
PA [auth Ln]Ribosomal_L41e6z6nLn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
QA [auth Lo]Ribosomal_L44e6z6nLo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
RA [auth Lp]Ribosomal_L37aee6z6nLp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
SA [auth Lr]Ribosomal_L28ee6z6nLr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
TA [auth Lz]Ribosomal_L1_2nd_1e6z6nLz1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
TA [auth Lz]Ribosomal_L1_1st_1e6z6nLz2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)
VA [auth SA]Ribosomal_S2_2e6z6nSA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
E [auth LB]Ribosomal_L3e6z6nLB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
XA [auth SD]Ribosomal_S3_Ce6z6nSD1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
XA [auth SD]KH_2_3e6z6nSD2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
YA [auth SE]Ribosomal_S4ee6z6nSE2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
YA [auth SE]40S_S4_Ce6z6nSE3 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
YA [auth SE]RS4NTe6z6nSE1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
ZA [auth SF]Ribosomal_S7_1e6z6nSF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
AB [auth SH]Ribosomal_S7e_Ne6z6nSH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
AB [auth SH]Ribosomal_S7e_C_1e6z6nSH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
BB [auth SI]Ribosomal_S8ee6z6nSI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
CB [auth SK]S10_plectine6z6nSK1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
DB [auth SL]Ribosomal_S17_1e6z6nSL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
EB [auth SP]Ribosomal_S19e6z6nSP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
FB [auth SQ]Ribosomal_S9e6z6nSQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
GB [auth SR]Ribosomal_S17ee6z6nSR1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
F [auth LC]Ribosomal_L4e6z6nLC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
F [auth LC]Ribos_L4_asso_Ce6z6nLC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
JB [auth SU]Ribosomal_S10_1e6z6nSU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
KB [auth SV]Ribosomal_S21ee6z6nSV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
LB [auth SX]Ribosom_S12_S23e6z6nSX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
MB [auth Sa]Ribosomal_S26ee6z6nSa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
NB [auth Sc]Ribosomal_S28ee6z6nSc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
OB [auth Sd]Ribosomal_S14_2e6z6nSd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
PB [auth Sg]DUF1899e6z6nSg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: DUF1899ECOD (1.6)
QB [auth SC]Ribosomal_S5_C_1e6z6nSC2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
QB [auth SC]Ribosomal_S5_3e6z6nSC3 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
QB [auth SC]Ribosomal_S5_2e6z6nSC1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
G [auth LD]Ribosomal_L5ee6z6nLD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
RB [auth SG]Ribosomal_S6ee6z6nSG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
SB [auth SJ]S4e6z6nSJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
TB [auth SM]Ribosomal_L7Aee6z6nSM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
UB [auth SN]Ribosomal_S13_Ne6z6nSN2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
UB [auth SN]Ribosomal_S15_2e6z6nSN1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
VB [auth SO]Ribosomal_S11e6z6nSO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
WB [auth SW]Ribosomal_S8_N_1e6z6nSW1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
WB [auth SW]Ribosomal_S8_C_1e6z6nSW2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
XB [auth SY]Ribosomal_S24ee6z6nSY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
YB [auth SZ]Ribosomal_S25e6z6nSZ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
ZB [auth Sb]Ribosomal_S27ee6z6nSb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
AC [auth Se]Ribosomal_S30e6z6nSe1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
H [auth LE]Ribosomal_L6ee6z6nLE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
BC [auth Sf]Ribosomal_S27e6z6nSf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
CC [auth CA]crvDNA_42Ke6z6nCA2 A: alpha arraysX: HTHH: HTHT: wingedF: crvDNA_42KECOD (1.6)
CC [auth CA]Peptidase_M24e6z6nCA1 A: a+b duplicates or obligate multimersX: Creatinase/aminopeptidase-likeH: Creatinase/aminopeptidase (From Topology)T: Creatinase/aminopeptidaseF: Peptidase_M24ECOD (1.6)
DC [auth CB]GTP_EFTU_D2e6z6nCB4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2ECOD (1.6)
DC [auth CB]EFG_IVe6z6nCB1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: EFG_IVECOD (1.6)
DC [auth CB]EFG_Ce6z6nCB5 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_CECOD (1.6)
DC [auth CB]EFG_IIe6z6nCB2 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_IIECOD (1.6)
DC [auth CB]MnmE_helical_2nde6z6nCB3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
FC [auth CD]HABP4_PAI-RBP1_Ce6z6nCD1 A: extended segmentsX: Suppressor protein STM1 (From Topology)H: Suppressor protein STM1 (From Topology)T: Suppressor protein STM1F: HABP4_PAI-RBP1_CECOD (1.6)
I [auth LF]Ribosomal_L30_1e6z6nLF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
M [auth LJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
M [auth LJ]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
M [auth LJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
Z [auth LX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
WA [auth SB]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
HB [auth SS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
IB [auth ST]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
J [auth LG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
K [auth LH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
K [auth LH]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
L [auth LI]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
L [auth LI]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
N [auth LL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
N [auth LL]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
O [auth LM]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
O [auth LM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
P [auth LN]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
P [auth LN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
Q [auth LO]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
Q [auth LO]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
R [auth LP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
R [auth LP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
S [auth LQ]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
T [auth LR]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
T [auth LR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
U [auth LS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
X [auth LV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
Y [auth LW]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
AA [auth LY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
AA [auth LY]PF00467KOW motif (KOW)KOW motif- Family
BA [auth LZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
BA [auth LZ]PF00467KOW motif (KOW)KOW motif- Family
BA [auth LZ]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
D [auth LA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
D [auth LA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
D [auth LA]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
VA [auth SA]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
VA [auth SA]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
E [auth LB]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
XA [auth SD]PF07650KH domain (KH_2)KH domain- Domain
XA [auth SD]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
XA [auth SD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
YA [auth SE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
YA [auth SE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
YA [auth SE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
YA [auth SE]PF00467KOW motif (KOW)KOW motif- Family
ZA [auth SF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
ZA [auth SF]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
AB [auth SH]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
BB [auth SI]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
CB [auth SK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
DB [auth SL]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
DB [auth SL]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
EB [auth SP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
FB [auth SQ]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
GB [auth SR]PF00833Ribosomal S17 (Ribosomal_S17e)Ribosomal S17- Family
F [auth LC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
F [auth LC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth LC]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
JB [auth SU]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
KB [auth SV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
LB [auth SX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
QB [auth SC]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
QB [auth SC]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
QB [auth SC]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
G [auth LD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
G [auth LD]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
G [auth LD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
RB [auth SG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
RB [auth SG]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
SB [auth SJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
SB [auth SJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
TB [auth SM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
UB [auth SN]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
VB [auth SO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
WB [auth SW]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
XB [auth SY]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
H [auth LE]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
H [auth LE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
CC [auth CA]PF00557Metallopeptidase family M24 (Peptidase_M24)Metallopeptidase family M24This family contains metallopeptidases. It also contains non-peptidase homologues such as the N terminal domain of Spt16 which is a histone H3-H4 binding module [3].Domain
DC [auth CB]PF00679Elongation factor G C-terminus (EFG_C)Elongation factor G C-terminusThis domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold.Domain
DC [auth CB]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
DC [auth CB]PF14492Elongation Factor G, domain III (EFG_III)Elongation Factor G, domain IIIThis domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1].Domain
DC [auth CB]PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain
DC [auth CB]PF03764Elongation factor G, domain IV (EFG_IV)Elongation factor G, domain IVThis domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold.Domain
I [auth LF]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
I [auth LF]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
M [auth LJ]60S ribosomal protein L11
Z [auth LX]60S ribosomal protein L23a
WA [auth SB]40S ribosomal protein S3a
HB [auth SS]40S ribosomal protein S18
IB [auth ST]40S ribosomal protein S19
A [auth L5]28S rRNA---
J [auth LG]60S ribosomal protein L7a
K [auth LH]60S ribosomal protein L9
L [auth LI]60S ribosomal protein L10-like
N [auth LL]60S ribosomal protein L13
O [auth LM]60S ribosomal protein L14
P [auth LN]60S ribosomal protein L15
Q [auth LO]60S ribosomal protein L13a
R [auth LP]60S ribosomal protein L17
S [auth LQ]60S ribosomal protein L18
B [auth L7]5S rRNA---
T [auth LR]60S ribosomal protein L19
U [auth LS]60S ribosomal protein L18a
V [auth LT]60S ribosomal protein L21
W [auth LU]60S ribosomal protein L22
X [auth LV]60S ribosomal protein L23
Y [auth LW]60S ribosomal protein L24
AA [auth LY]60S ribosomal protein L26
BA [auth LZ]60S ribosomal protein L27
CA [auth La]60S ribosomal protein L27a
C [auth L8]5.8S rRNA---
DA [auth Lb]60S ribosomal protein L29
EA [auth Lc]60S ribosomal protein L30
FA [auth Ld]60S ribosomal protein L31
GA [auth Le]60S ribosomal protein L32
HA [auth Lf]60S ribosomal protein L35a
IA [auth Lg]60S ribosomal protein L34
JA [auth Lh]60S ribosomal protein L35
KA [auth Li]60S ribosomal protein L36
LA [auth Lj]60S ribosomal protein L37
MA [auth Lk]60S ribosomal protein L38
D [auth LA]60S ribosomal protein L8
NA [auth Ll]60S ribosomal protein L39
OA [auth Lm]Ubiquitin-60S ribosomal protein L40
PA [auth Ln]60S ribosomal protein L41
QA [auth Lo]60S ribosomal protein L36a
RA [auth Lp]60S ribosomal protein L37a
SA [auth Lr]60S ribosomal protein L28
TA [auth Lz]60S ribosomal protein L10a
UA [auth S2]18S rRNA---
VA [auth SA]40S ribosomal protein SA
E [auth LB]60S ribosomal protein L3
XA [auth SD]40S ribosomal protein S3
YA [auth SE]40S ribosomal protein S4, X isoform
ZA [auth SF]40S ribosomal protein S5
AB [auth SH]40S ribosomal protein S7
BB [auth SI]40S ribosomal protein S8
CB [auth SK]40S ribosomal protein S10
DB [auth SL]40S ribosomal protein S11
EB [auth SP]40S ribosomal protein S15
FB [auth SQ]40S ribosomal protein S16
GB [auth SR]40S ribosomal protein S17
F [auth LC]60S ribosomal protein L4
JB [auth SU]40S ribosomal protein S20
KB [auth SV]40S ribosomal protein S21
LB [auth SX]40S ribosomal protein S23
MB [auth Sa]40S ribosomal protein S26
NB [auth Sc]40S ribosomal protein S28
OB [auth Sd]40S ribosomal protein S29
PB [auth Sg]Receptor of activated protein C kinase 1
QB [auth SC]40S ribosomal protein S2
G [auth LD]60S ribosomal protein L5
RB [auth SG]40S ribosomal protein S6
SB [auth SJ]40S ribosomal protein S9
TB [auth SM]40S ribosomal protein S12
UB [auth SN]40S ribosomal protein S13
VB [auth SO]40S ribosomal protein S14
WB [auth SW]40S ribosomal protein S15a
XB [auth SY]40S ribosomal protein S24
YB [auth SZ]40S ribosomal protein S25
ZB [auth Sb]40S ribosomal protein S27
AC [auth Se]40S ribosomal protein S30
H [auth LE]60S ribosomal protein L6
BC [auth Sf]Ubiquitin-40S ribosomal protein S27a
CC [auth CA]Proliferation-associated protein 2G4
DC [auth CB]Elongation factor 2
EC [auth CC]tRNA---
FC [auth CD]Plasminogen activator inhibitor 1 RNA-binding protein
I [auth LF]60S ribosomal protein L7

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
M [auth LJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
M [auth LJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
M [auth LJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
M [auth LJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
M [auth LJ]IPR002132Large ribosomal subunit protein uL5Family
Z [auth LX]IPR019985Large ribosomal subunit protein uL23Family
Z [auth LX]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
Z [auth LX]IPR013025Large ribosomal subunit protein uL23-likeFamily
Z [auth LX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Z [auth LX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
Z [auth LX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
WA [auth SB]IPR001593Small ribosomal subunit protein eS1Family
WA [auth SB]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
WA [auth SB]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
HB [auth SS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
HB [auth SS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
HB [auth SS]IPR001892Small ribosomal subunit protein uS13Family
HB [auth SS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
IB [auth ST]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
IB [auth ST]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
IB [auth ST]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
IB [auth ST]IPR001266Small ribosomal subunit protein eS19Family
J [auth LG]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
J [auth LG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth LG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth LG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth LG]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
J [auth LG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
K [auth LH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth LH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
K [auth LH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
K [auth LH]IPR000702Large ribosomal subunit protein uL6-likeFamily
L [auth LI]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth LI]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
L [auth LI]IPR047873Large ribosomal subunit protein uL16Family
L [auth LI]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
L [auth LI]IPR016180Large ribosomal subunit protein uL16 domainDomain
N [auth LL]IPR001380Large ribosomal subunit protein eL13Family
N [auth LL]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
O [auth LM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
O [auth LM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth LM]IPR039660Large ribosomal subunit protein eL14Family
O [auth LM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
O [auth LM]IPR002784Large ribosomal subunit protein eL14 domainDomain
P [auth LN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
P [auth LN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth LN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
P [auth LN]IPR000439Large ribosomal subunit protein eL15Family
Q [auth LO]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
Q [auth LO]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
Q [auth LO]IPR005822Large ribosomal subunit protein uL13Family
Q [auth LO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
R [auth LP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth LP]IPR001063Large ribosomal subunit protein uL22Family
R [auth LP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth LP]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
S [auth LQ]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
S [auth LQ]IPR000039Large ribosomal subunit protein eL18Family
S [auth LQ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
S [auth LQ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
T [auth LR]IPR039547Large ribosomal subunit protein eL19Family
T [auth LR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
T [auth LR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
T [auth LR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
T [auth LR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
T [auth LR]IPR000196Large ribosomal subunit protein eL19 domainDomain
U [auth LS]IPR028877Large ribosomal subunit protein eL20Family
U [auth LS]IPR023573Large ribosomal subunit protein eL20 domainDomain
U [auth LS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
V [auth LT]IPR001147Large ribosomal subunit protein eL21Family
V [auth LT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V [auth LT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
V [auth LT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
W [auth LU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
W [auth LU]IPR002671Large ribosomal subunit protein eL22Family
X [auth LV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
X [auth LV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
X [auth LV]IPR000218Large ribosomal subunit protein uL14Family
Y [auth LW]IPR011017TRASH domainDomain
Y [auth LW]IPR000988Large ribosomal subunit protein eL24-relatedFamily
Y [auth LW]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
Y [auth LW]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
AA [auth LY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth LY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
AA [auth LY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth LY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth LY]IPR005824KOWDomain
AA [auth LY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
BA [auth LZ]IPR001141Large ribosomal subunit protein eL27Family
BA [auth LZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
BA [auth LZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth LZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
BA [auth LZ]IPR005824KOWDomain
BA [auth LZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
CA [auth La]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
CA [auth La]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
CA [auth La]IPR021131Large ribosomal subunit protein uL15/eL18Domain
CA [auth La]IPR030878Large ribosomal subunit protein uL15Family
CA [auth La]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DA [auth Lb]IPR002673Large ribosomal subunit protein eL29Family
EA [auth Lc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
EA [auth Lc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth Lc]IPR000231Large ribosomal subunit protein eL30Family
EA [auth Lc]IPR039109Large ribosomal subunit protein eL30-likeFamily
EA [auth Lc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
FA [auth Ld]IPR000054Large ribosomal subunit protein eL31Family
FA [auth Ld]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
FA [auth Ld]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
GA [auth Le]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
GA [auth Le]IPR001515Large ribosomal subunit protein eL32Family
GA [auth Le]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
HA [auth Lf]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
HA [auth Lf]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
HA [auth Lf]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
HA [auth Lf]IPR001780Large ribosomal subunit protein eL33Family
IA [auth Lg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
IA [auth Lg]IPR008195Large ribosomal subunit protein eL34Family
JA [auth Lh]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
JA [auth Lh]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
JA [auth Lh]IPR001854Large ribosomal subunit protein uL29Family
JA [auth Lh]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
KA [auth Li]IPR000509Large ribosomal subunit protein eL36Family
KA [auth Li]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
LA [auth Lj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
LA [auth Lj]IPR001569Large ribosomal subunit protein eL37Family
LA [auth Lj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
LA [auth Lj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
MA [auth Lk]IPR002675Large ribosomal subunit protein eL38Family
MA [auth Lk]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
D [auth LA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth LA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth LA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth LA]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
D [auth LA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth LA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth LA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth LA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth LA]IPR002171Large ribosomal subunit protein uL2Family
NA [auth Ll]IPR000077Large ribosomal subunit protein eL39Family
NA [auth Ll]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
NA [auth Ll]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
OA [auth Lm]IPR019954Ubiquitin conserved siteConserved Site
OA [auth Lm]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
OA [auth Lm]IPR050158Ubiquitin and ubiquitin-likeFamily
OA [auth Lm]IPR000626Ubiquitin-like domainDomain
OA [auth Lm]IPR019956Ubiquitin domainDomain
OA [auth Lm]IPR001975Large ribosomal subunit protein eL40 domainDomain
OA [auth Lm]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
PA [auth Ln]IPR007836Large ribosomal subunit protein eS32Family
QA [auth Lo]IPR000552Large ribosomal subunit protein eL42Family
QA [auth Lo]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
QA [auth Lo]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth Lp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
RA [auth Lp]IPR002674Large ribosomal subunit protein eL43Family
RA [auth Lp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SA [auth Lr]IPR029004Ribosomal eL28/Mak16Domain
SA [auth Lr]IPR002672Large ribosomal subunit protein eL28Family
TA [auth Lz]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
TA [auth Lz]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
TA [auth Lz]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
TA [auth Lz]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
TA [auth Lz]IPR002143Large ribosomal subunit protein uL1Family
TA [auth Lz]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
VA [auth SA]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
VA [auth SA]IPR001865Small ribosomal subunit protein uS2Family
VA [auth SA]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
VA [auth SA]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
VA [auth SA]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
VA [auth SA]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
VA [auth SA]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
E [auth LB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth LB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
E [auth LB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
E [auth LB]IPR000597Large ribosomal subunit protein uL3Family
E [auth LB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
XA [auth SD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
XA [auth SD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
XA [auth SD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
XA [auth SD]IPR004044K Homology domain, type 2Domain
XA [auth SD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
XA [auth SD]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
XA [auth SD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
YA [auth SE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
YA [auth SE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
YA [auth SE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
YA [auth SE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
YA [auth SE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
YA [auth SE]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
YA [auth SE]IPR002942RNA-binding S4 domainDomain
YA [auth SE]IPR000876Small ribosomal subunit protein eS4Family
YA [auth SE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
YA [auth SE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
YA [auth SE]IPR005824KOWDomain
ZA [auth SF]IPR023798Small ribosomal subunit protein uS7 domainDomain
ZA [auth SF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
ZA [auth SF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
ZA [auth SF]IPR000235Small ribosomal subunit protein uS7Family
ZA [auth SF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
AB [auth SH]IPR000554Small ribosomal subunit protein eS7Family
AB [auth SH]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
BB [auth SI]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
BB [auth SI]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
BB [auth SI]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
BB [auth SI]IPR001047Small ribosomal subunit protein eS8Family
CB [auth SK]IPR037447Small ribosomal subunit protein eS10Family
CB [auth SK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
CB [auth SK]IPR005326Plectin/eS10, N-terminalDomain
DB [auth SL]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
DB [auth SL]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
DB [auth SL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
DB [auth SL]IPR000266Small ribosomal subunit protein uS17Family
DB [auth SL]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
EB [auth SP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
EB [auth SP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
EB [auth SP]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
EB [auth SP]IPR002222Small ribosomal subunit protein uS19Family
FB [auth SQ]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
FB [auth SQ]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
FB [auth SQ]IPR000754Small ribosomal subunit protein uS9Family
FB [auth SQ]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
GB [auth SR]IPR001210Small ribosomal subunit protein eS17Family
GB [auth SR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
GB [auth SR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
F [auth LC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
F [auth LC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
F [auth LC]IPR002136Large ribosomal subunit protein uL4Family
F [auth LC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
F [auth LC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
JB [auth SU]IPR027486Small ribosomal subunit protein uS10 domainDomain
JB [auth SU]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
JB [auth SU]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
JB [auth SU]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
JB [auth SU]IPR001848Small ribosomal subunit protein uS10Family
KB [auth SV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
KB [auth SV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
KB [auth SV]IPR001931Small ribosomal subunit protein eS21Family
LB [auth SX]IPR006032Small ribosomal subunit protein uS12Family
LB [auth SX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
LB [auth SX]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
MB [auth Sa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
MB [auth Sa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
MB [auth Sa]IPR000892Small ribosomal subunit protein eS26Family
NB [auth Sc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
NB [auth Sc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
NB [auth Sc]IPR000289Small ribosomal subunit protein eS28Family
OB [auth Sd]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
OB [auth Sd]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
OB [auth Sd]IPR001209Small ribosomal subunit protein uS14Family
OB [auth Sd]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
PB [auth Sg]IPR019775WD40 repeat, conserved siteConserved Site
PB [auth Sg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
PB [auth Sg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
PB [auth Sg]IPR020472G-protein beta WD-40 repeatRepeat
PB [auth Sg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
PB [auth Sg]IPR001680WD40 repeatRepeat
QB [auth SC]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
QB [auth SC]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
QB [auth SC]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
QB [auth SC]IPR000851Small ribosomal subunit protein uS5Family
QB [auth SC]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
QB [auth SC]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
QB [auth SC]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
G [auth LD]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
G [auth LD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
RB [auth SG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
RB [auth SG]IPR001377Small ribosomal subunit protein eS6Family
RB [auth SG]IPR014401Small ribosomal subunit protein eS6-likeFamily
SB [auth SJ]IPR002942RNA-binding S4 domainDomain
SB [auth SJ]IPR022801Small ribosomal subunit protein uS4Family
SB [auth SJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
SB [auth SJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
SB [auth SJ]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
SB [auth SJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
TB [auth SM]IPR000530Small ribosomal subunit protein eS12Family
TB [auth SM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
TB [auth SM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
TB [auth SM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
UB [auth SN]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
UB [auth SN]IPR000589Small ribosomal subunit protein uS15Family
UB [auth SN]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
UB [auth SN]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
VB [auth SO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
VB [auth SO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
VB [auth SO]IPR001971Small ribosomal subunit protein uS11Family
WB [auth SW]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
WB [auth SW]IPR000630Small ribosomal subunit protein uS8Family
WB [auth SW]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
XB [auth SY]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
XB [auth SY]IPR001976Small ribosomal subunit protein eS24Family
XB [auth SY]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
XB [auth SY]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
YB [auth SZ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
YB [auth SZ]IPR004977Small ribosomal subunit protein eS25Family
ZB [auth Sb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
ZB [auth Sb]IPR000592Small ribosomal subunit protein eS27Family
ZB [auth Sb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AC [auth Se]IPR019954Ubiquitin conserved siteConserved Site
AC [auth Se]IPR000626Ubiquitin-like domainDomain
AC [auth Se]IPR006846Small ribosomal subunit protein eS30Family
AC [auth Se]IPR039415Ubiquitin-like protein FUBIDomain
AC [auth Se]IPR019956Ubiquitin domainDomain
AC [auth Se]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
H [auth LE]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
H [auth LE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
H [auth LE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth LE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
H [auth LE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
H [auth LE]IPR000915Large ribosomal subunit protein eL6Family
BC [auth Sf]IPR019954Ubiquitin conserved siteConserved Site
BC [auth Sf]IPR050158Ubiquitin and ubiquitin-likeFamily
BC [auth Sf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BC [auth Sf]IPR000626Ubiquitin-like domainDomain
BC [auth Sf]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
BC [auth Sf]IPR002906Small ribosomal subunit protein eS31Domain
BC [auth Sf]IPR019956Ubiquitin domainDomain
BC [auth Sf]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
CC [auth CA]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
CC [auth CA]IPR047113Proliferation-associated protein 2G4/ARX1Family
CC [auth CA]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
CC [auth CA]IPR018349Peptidase M24A, methionine aminopeptidase, subfamily 2, binding siteBinding Site
CC [auth CA]IPR036005Creatinase/aminopeptidase-likeHomologous Superfamily
CC [auth CA]IPR004545PA2G4 familyFamily
CC [auth CA]IPR000994Peptidase M24Domain
DC [auth CB]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
DC [auth CB]IPR000795Translational (tr)-type GTP-binding domainDomain
DC [auth CB]IPR035647EF-G domain III/V-likeHomologous Superfamily
DC [auth CB]IPR041095Elongation Factor G, domain IIDomain
DC [auth CB]IPR004161Translation elongation factor EFTu-like, domain 2Domain
DC [auth CB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DC [auth CB]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
DC [auth CB]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
DC [auth CB]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
DC [auth CB]IPR005225Small GTP-binding domainDomain
DC [auth CB]IPR000640Elongation factor EFG, domain V-likeDomain
DC [auth CB]IPR031157Tr-type G domain, conserved siteConserved Site
FC [auth CD]IPR039764RNA binding protein HABP4/SERBP1-likeFamily
FC [auth CD]IPR006861Hyaluronan/mRNA-binding proteinDomain
FC [auth CD]IPR032381Intracellular hyaluronan-binding protein 4, N-terminal domainDomain
I [auth LF]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
I [auth LF]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
I [auth LF]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
I [auth LF]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
I [auth LF]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
I [auth LF]IPR039699Large ribosomal subunit protein uL30Family
I [auth LF]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
M [auth LJ]PharosP62913
Z [auth LX]PharosP62750
HB [auth SS]PharosP62269
IB [auth ST]PharosP39019
J [auth LG]PharosP62424
K [auth LH]PharosP32969
L [auth LI]PharosQ96L21
N [auth LL]PharosP26373
O [auth LM]PharosP50914
P [auth LN]PharosP61313
Q [auth LO]PharosP40429
R [auth LP]PharosP18621
S [auth LQ]PharosQ07020
T [auth LR]PharosP84098
V [auth LT]PharosP46778
W [auth LU]PharosP35268
X [auth LV]PharosP62829
Y [auth LW]PharosP83731
AA [auth LY]PharosP61254
BA [auth LZ]PharosP61353
CA [auth La]PharosP46776
EA [auth Lc]PharosP62888
FA [auth Ld]PharosP62899
GA [auth Le]PharosP62910
HA [auth Lf]PharosP18077
IA [auth Lg]PharosP49207
JA [auth Lh]PharosP42766
KA [auth Li]PharosQ9Y3U8
LA [auth Lj]PharosP61927
MA [auth Lk]PharosP63173
OA [auth Lm]PharosP62987
PA [auth Ln]PharosP62945
QA [auth Lo]PharosP83881
RA [auth Lp]PharosP61513
SA [auth Lr]PharosP46779
TA [auth Lz]PharosP62906
VA [auth SA]PharosP08865
E [auth LB]PharosP39023
XA [auth SD]PharosP23396
YA [auth SE]PharosP62701
ZA [auth SF]PharosP46782
AB [auth SH]PharosP62081
BB [auth SI]PharosP62241
CB [auth SK]PharosP46783
DB [auth SL]PharosP62280
EB [auth SP]PharosP62841
FB [auth SQ]PharosP62249
GB [auth SR]PharosP08708
F [auth LC]PharosP36578
JB [auth SU]PharosP60866
KB [auth SV]PharosP63220
LB [auth SX]PharosP62266
MB [auth Sa]PharosP62854
NB [auth Sc]PharosP62857
OB [auth Sd]PharosP62273
PB [auth Sg]PharosP63244
QB [auth SC]PharosP15880
G [auth LD]PharosP46777
RB [auth SG]PharosP62753
SB [auth SJ]PharosP46781
TB [auth SM]PharosP25398
UB [auth SN]PharosP62277
VB [auth SO]PharosP62263
WB [auth SW]PharosP62244
XB [auth SY]PharosP62847
YB [auth SZ]PharosP62851
ZB [auth Sb]PharosP42677
AC [auth Se]PharosP62861
H [auth LE]PharosQ02878
BC [auth Sf]PharosP62979
CC [auth CA]PharosQ9UQ80
DC [auth CB]PharosP13639
FC [auth CD]PharosQ8NC51
I [auth LF]PharosP18124