3.0 A resolution structure of a DNA-loaded MCM double hexamer
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth 2] | MCM_OB | e7p3023 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
A [auth 2] | MCM_C | e7p3021 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
A [auth 2] | MCM_N | e7p3025 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
A [auth 2] | MCM_AAA | e7p3022 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
A [auth 2] | MCM_OB_4 | e7p3024 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_4 | ECOD (1.6) |
G [auth A] | MCM_OB | e7p30A2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
G [auth A] | MCM_C | e7p30A4 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
G [auth A] | MCM_N | e7p30A1 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
G [auth A] | MCM_AAA | e7p30A5 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
G [auth A] | MCM_OB_4 | e7p30A3 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_4 | ECOD (1.6) |
B [auth 3] | MCM_OB | e7p3033 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
B [auth 3] | MCM_C | e7p3035 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
B [auth 3] | MCM_N | e7p3032 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
B [auth 3] | MCM_AAA | e7p3031 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
B [auth 3] | KOG0479 | e7p3034 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: KOG0479 | ECOD (1.6) |
H [auth B] | MCM_OB | e7p30B5 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
H [auth B] | MCM_C | e7p30B1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
H [auth B] | MCM_N | e7p30B2 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
H [auth B] | MCM_AAA | e7p30B3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
H [auth B] | KOG0479 | e7p30B4 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: KOG0479 | ECOD (1.6) |
C [auth 4] | MCM_OB | e7p3044 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
C [auth 4] | MCM_C | e7p3041 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
C [auth 4] | MCM_N | e7p3045 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
C [auth 4] | MCM_AAA | e7p3043 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
C [auth 4] | MCM_OB_1 | e7p3042 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_1 | ECOD (1.6) |
I [auth C] | MCM_OB | e7p30C2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
I [auth C] | MCM_C | e7p30C1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
I [auth C] | MCM_N | e7p30C4 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
I [auth C] | MCM_AAA | e7p30C3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
I [auth C] | MCM_OB_1 | e7p30C5 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_1 | ECOD (1.6) |
K [auth E] | MCM_OB | e7p30E2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
K [auth E] | MCM_C | e7p30E5 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
K [auth E] | MCM_N | e7p30E3 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
K [auth E] | MCM_AAA | e7p30E4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
K [auth E] | MCM_OB_2 | e7p30E1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_2 | ECOD (1.6) |
E [auth 6] | MCM_OB | e7p3065 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
E [auth 6] | MCM_C | e7p3061 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
E [auth 6] | MCM_N | e7p3062 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N | ECOD (1.6) |
E [auth 6] | MCM_AAA | e7p3064 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
E [auth 6] | MCM_OB_2 | e7p3063 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: MCM_OB_2 | ECOD (1.6) |
F [auth 7] | MCM_OB | e7p3071 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
F [auth 7] | MCM_C | e7p3074 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
F [auth 7] | MCM_N_1 | e7p3075 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N_1 | ECOD (1.6) |
F [auth 7] | MCM_AAA | e7p3073 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
F [auth 7] | KOG0482 | e7p3072 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: KOG0482 | ECOD (1.6) |
L [auth F] | MCM_OB | e7p30F2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: MCM_OB | ECOD (1.6) |
L [auth F] | MCM_C | e7p30F5 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: MCM_C | ECOD (1.6) |
L [auth F] | MCM_N_1 | e7p30F4 | A: a+b complex topology | X: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | H: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) (From Topology) | T: N-terminal subdomain in DNA replication initiator (cdc21/cdc54) | F: MCM_N_1 | ECOD (1.6) |
L [auth F] | MCM_AAA | e7p30F1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MCM_AAA | ECOD (1.6) |
L [auth F] | KOG0482 | e7p30F3 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: KOG0482 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
D [auth 5], J [auth D] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
D [auth 5], J [auth D] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
D [auth 5], J [auth D] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
D [auth 5], J [auth D] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |
A [auth 2], G [auth A] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
A [auth 2], G [auth A] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
A [auth 2], G [auth A] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
A [auth 2], G [auth A] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |
B [auth 3], H [auth B] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
B [auth 3], H [auth B] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
B [auth 3], H [auth B] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
B [auth 3], H [auth B] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |
C [auth 4], I [auth C] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
C [auth 4], I [auth C] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
C [auth 4], I [auth C] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
C [auth 4], I [auth C] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |
E [auth 6], K [auth E] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
E [auth 6], K [auth E] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
E [auth 6], K [auth E] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
E [auth 6], K [auth E] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |
F [auth 7], L [auth F] | PF00493 | MCM P-loop domain (MCM) | MCM P-loop domain | Domain | |
F [auth 7], L [auth F] | PF14551 | MCM N-terminal domain (MCM_N) | MCM N-terminal domain | This family contains the N-terminal domain of MCM proteins. | Domain |
F [auth 7], L [auth F] | PF17855 | MCM AAA-lid domain (MCM_lid) | MCM AAA-lid domain | This entry represents the AAA-lid domain found in MCM proteins. | Domain |
F [auth 7], L [auth F] | PF17207 | MCM OB domain (MCM_OB) | MCM OB domain | This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2]. | Domain |