8WLH | pdb_00008wlh

Cryo-EM structure of the proximal rod-export apparatus and FlgF within the motor-hook complex in the CCW state

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
A, B, C, D
PF06429Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)Flagellar basal body rod FlgEFG protein C-terminalThis family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus. Domain
A, B, C, D
PF01313Bacterial export proteins, family 3 (Bac_export_3)Bacterial export proteins, family 3- Family
PF01311Bacterial export proteins, family 1 (Bac_export_1)Bacterial export proteins, family 1- Family
F, G, H, I, J
PF00813FliP family (FliP)FliP family- Family
K, L, M, N, O
PF22692Flagellar hook protein FlgE/F/G D1 domain (LlgE_F_G_D1)Flagellar hook protein FlgE/F/G D1 domainThis entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular ...This entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular structure that connects the flagellar motor to the long filament acting as a helical propeller.
Domain
K, L, M, N, O
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
Q, R, S, T, U
PF22692Flagellar hook protein FlgE/F/G D1 domain (LlgE_F_G_D1)Flagellar hook protein FlgE/F/G D1 domainThis entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular ...This entry represents the D1 domain found in three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. In FlgE there is an additional domain (D2, Pfam:PF07559) outside D1 [1-5]. The flagellar hook is a short, highly curved tubular structure that connects the flagellar motor to the long filament acting as a helical propeller.
Domain
Q, R, S, T, U
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
PF00460Flagella basal body rod protein (Flg_bb_rod)Flagella basal body rod protein- Family
PF06429Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)Flagellar basal body rod FlgEFG protein C-terminalThis family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Flagellar biosynthetic protein FliQ-
Flagellar biosynthetic protein FliR-
F, G, H, I, J
Flagellar biosynthetic protein FliP-
K, L, M, N, O
Flagellar hook-basal body complex protein FliE
Q, R, S, T, U
Flagellar basal body rod protein FlgB-
Flagellar basal-body rod protein FlgC-
Flagellar M-ring protein
MA [auth m],
NA [auth n],
OA [auth o],
PA [auth p],
QA [auth q]		Flagellar basal-body rod protein FlgF-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR006305Flagellar biosynthesis protein FliQFamily
A, B, C, D
IPR002191Bacterial export protein family 3Family
IPR002010Type III secretion system inner membrane R proteinFamily
IPR006303Flagellar biosynthesis protein FliRFamily
F, G, H, I, J
IPR005838Type III secretion system inner membrane P proteinFamily
F, G, H, I, J
IPR005837Flagellar transport protein FliPFamily
K, L, M, N, O
IPR001624Flagellar hook-basal body complex protein FliEFamily
Q, R, S, T, U
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
Q, R, S, T, U
IPR001444Flagellar basal body rod protein, N-terminalDomain
Q, R, S, T, U
IPR006300Flagellar basal-body rod protein FlgBFamily
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR006299Flagellar basal-body rod protein FlgCFamily
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR001444Flagellar basal body rod protein, N-terminalDomain
IPR045851AMP-binding enzyme, C-terminal domain superfamilyHomologous Superfamily
IPR006182Flagellar M-ring, N-terminalDomain
IPR013556Flagellar M-ring C-terminalDomain
IPR043427Lipoprotein YscJ/Flagellar M-ring proteinFamily
IPR000067Flagellar M-ring protein FliFFamily
MA [auth m],
NA [auth n],
OA [auth o],
PA [auth p],
QA [auth q]		IPR019776Flagellar basal body rod protein, conserved siteConserved Site
MA [auth m],
NA [auth n],
OA [auth o],
PA [auth p],
QA [auth q]		IPR020013Flagellar hook-basal body protein, FlgE/F/GFamily
MA [auth m],
NA [auth n],
OA [auth o],
PA [auth p],
QA [auth q]		IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
MA [auth m],
NA [auth n],
OA [auth o],
PA [auth p],
QA [auth q]		IPR053967Flagellar hook protein FlgE/F/G-like, D1 domainDomain
MA [auth m],
NA [auth n],
OA [auth o],
PA [auth p],
QA [auth q]		IPR001444Flagellar basal body rod protein, N-terminalDomain
MA [auth m],
NA [auth n],
OA [auth o],
PA [auth p],
QA [auth q]		IPR037925Flagellar hook-basal body protein, FlgE/F/G-likeHomologous Superfamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALFlagellar Motor Proteinsintact flagellar motor-hook complex, CW state