NMR SOLUTION STRUCTURE OF THE LAST UNKNOWN MODULE OF THE CELLULOSOMAL SCAFFOLDIN PROTEIN CIPC OF CLOSTRIDUM CELLULOLYTICUM
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 25 mM X2 uniform labelling 15N; 20 mM acetate buffer Na; 90% H2O, 10% D2O | 5.0 | ambient | 300 | |||
2 | 3D_15N-separated_NOESY | 25 mM X2 uniform labelling 15N; 20 mM acetate buffer Na; 90% H2O, 10% D2O | 5.0 | ambient | 300 | |||
3 | DQF-COSY | 25 mM X2 uniform labelling 15N; 20 mM acetate buffer Na; 90% H2O, 10% D2O | 5.0 | ambient | 300 | |||
4 | 2D_15N_HSQC | 25 mM X2 uniform labelling 15N; 20 mM acetate buffer Na; 90% H2O, 10% D2O | 5.0 | ambient | 300 | |||
5 | 2D_15N_HSQC_NOESY | 25 mM X2 uniform labelling 15N; 20 mM acetate buffer Na; 90% H2O, 10% D2O | 5.0 | ambient | 300 | |||
6 | 2D_15N_HSQC_TOCSY | 25 mM X2 uniform labelling 15N; 20 mM acetate buffer Na; 90% H2O, 10% D2O | 5.0 | ambient | 300 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
distance geometry, simulated annealing and torsion angle dynamics | the structures are based on a total of 1828 restraints, 1647 are NOE-derived distance constraints, 66 dihedral angle restraints, 105 distance restraints from hydrogen bonds | XwinNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | back calculated data agree with experimental NOESY spectrum, structures with acceptable covalent geometry, structures with favorable non-bond energy, structures with the least restraint violations, structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 20 |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | XwinNMR | 2.1 | |
2 | data analysis | XEASY | 1.2 | |
3 | structure solution | DIANA | 2.8 | |
4 | refinement | CNS | 1.0 |