X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 1CP3 

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.2845.7

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 123.45α = 90
b = 70.952β = 136.42
c = 95.86γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMARRESEARCH2001-11-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONSSRL BEAMLINE BL7-11.080SSRLBL7-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.653098.90.05312.262041-3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1CP31.7205890658906313598.830.152660.152660.151020.18335RANDOM16.586
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.790.64-0.020.16
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg14.799
r_scangle_it6.322
r_dihedral_angle_1_deg5.152
r_mcangle_it4.363
r_scbond_it4.308
r_mcbond_it2.74
r_angle_refined_deg1.735
r_nbd_refined0.237
r_symmetry_hbond_refined0.186
r_symmetry_vdw_refined0.164
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg14.799
r_scangle_it6.322
r_dihedral_angle_1_deg5.152
r_mcangle_it4.363
r_scbond_it4.308
r_mcbond_it2.74
r_angle_refined_deg1.735
r_nbd_refined0.237
r_symmetry_hbond_refined0.186
r_symmetry_vdw_refined0.164
r_xyhbond_nbd_refined0.158
r_chiral_restr0.154
r_bond_refined_d0.016
r_gen_planes_refined0.008
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3880
Nucleic Acid Atoms
Solvent Atoms587
Heterogen Atoms64

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
AMoREphasing
REFMACrefinement
CCP4data scaling