2GWK

SpvB ADP-ribosylated actin: orthorhombic crystal form

X-RAY DIFFRACTION

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Crystallization

Crystal Properties
Matthews coefficient	Solvent content
3.84	67.97

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 100.385	α = 90
b = 102.348	β = 90
c = 123.803	γ = 90

Symmetry
Space Group	P 21 21 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray					2004-10-29	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	NSLS BEAMLINE X9A	0.979	NSLS	X9A

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2	99					85152

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Factor (Observed)	R-Work	R-Free	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	2	32	80138	4084	92.47	0.173	0.172	0.171	0.211	RANDOM	33.432

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.37			0.13		0.23

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	34.824
r_dihedral_angle_4_deg	21.152
r_dihedral_angle_3_deg	16.685
r_dihedral_angle_1_deg	6.297
r_scangle_it	3.642
r_scbond_it	2.593
r_angle_refined_deg	1.835
r_mcangle_it	1.343
r_angle_other_deg	1.217
r_mcbond_it	1.004
r_xyhbond_nbd_other	0.29
r_symmetry_vdw_other	0.28
r_mcbond_other	0.273
r_nbd_refined	0.246
r_xyhbond_nbd_refined	0.218
r_nbd_other	0.212
r_symmetry_vdw_refined	0.209
r_symmetry_hbond_refined	0.199
r_nbtor_refined	0.181
r_chiral_restr	0.11
r_nbtor_other	0.093
r_metal_ion_refined	0.049
r_bond_refined_d	0.02
r_gen_planes_refined	0.008
r_bond_other_d	0.002
r_gen_planes_other	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	5708
Nucleic Acid Atoms
Solvent Atoms	618
Heterogen Atoms	64

Software

Software
Software Name	Purpose
REFMAC	refinement
PDB_EXTRACT	data extraction