2KGJ
Solution structure of parvulin domain of PpiD from E.Coli
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 100 mM potassium phosphate-1, 5 mM [U-15N] protein | 90% H2O/10% D2O | 0.1 | 7.0 | ambient | 298 | |
2 | 3D 1H-15N NOESY | 100 mM potassium phosphate-1, 5 mM [U-15N] protein | 90% H2O/10% D2O | 0.1 | 7.0 | ambient | 298 | |
3 | 3D 1H-15N TOCSY | 100 mM potassium phosphate-1, 5 mM [U-15N] protein | 90% H2O/10% D2O | 0.1 | 7.0 | ambient | 298 | |
4 | 2D 1H-1H NOESY | 100 mM potassium phosphate-1, 5 mM [U-15N] protein | 90% H2O/10% D2O | 0.1 | 7.0 | ambient | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 800 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
simulated annealing | ARIA |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 10 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | ARIA | 2.0 | Linge, O'Donoghue and Nilges |
2 | chemical shift assignment | ARIA | 2.0 | Linge, O'Donoghue and Nilges |
3 | refinement | ARIA | 2.0 | Linge, O'Donoghue and Nilges |