SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 20 mM sodium phosphate, 100 mM sodium chloride | 90% H2O/10% D2O | 0.1 | 6.9 | ambient | 298 | |
| 2 | 2D 1H-13C HSQC | 20 mM sodium phosphate, 100 mM sodium chloride | 90% H2O/10% D2O | 0.1 | 6.9 | ambient | 298 | |
| 3 | 3D CBCA(CO)NH | 20 mM sodium phosphate, 100 mM sodium chloride | 90% H2O/10% D2O | 0.1 | 6.9 | ambient | 298 | |
| 4 | 3D HNCA | 20 mM sodium phosphate, 100 mM sodium chloride | 90% H2O/10% D2O | 0.1 | 6.9 | ambient | 298 | |
| 5 | 3D HNCACB | 20 mM sodium phosphate, 100 mM sodium chloride | 90% H2O/10% D2O | 0.1 | 6.9 | ambient | 298 | |
| 6 | 3D HCCH-TOCSY | 20 mM sodium phosphate, 100 mM sodium chloride | 90% H2O/10% D2O | 0.1 | 6.9 | ambient | 298 | |
| 7 | 3D 1H-15N NOESY | 20 mM sodium phosphate, 100 mM sodium chloride | 90% H2O/10% D2O | 0.1 | 6.9 | ambient | 298 | |
| 8 | 3D 1H-13C NOESY aliphatic | 20 mM sodium phosphate, 100 mM sodium chloride | 100% D2O | 0.1 | 6.9 | ambient | 298 | |
| 9 | 2D 1H-13C HSQC aromatic | 20 mM sodium phosphate, 100 mM sodium chloride | 100% D2O | 0.1 | 6.9 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 500 |
| 2 | Bruker | DRX | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing, torsion angle dynamics | NMRView | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (closest to the average) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | peak picking | NMRView | Johnson, One Moon Scientific | |
| 2 | chemical shift assignment | NMRView | Johnson, One Moon Scientific | |
| 3 | data analysis | NMRView | Johnson, One Moon Scientific | |
| 4 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 5 | dihedral angle restraints | TALOS | Cornilescu, Delaglio and Bax | |
| 6 | structure quality analysis | ProcheckNMR | Laskowski and MacArthur | |
| 7 | structure quality analysis | WHAT IF | Vriend | |
| 8 | molecular images | MOLMOL | Koradi, Billeter and Wuthrich | |
| 9 | collection | TopSpin | Bruker Biospin | |
| 10 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
| 11 | refinement | CYANA | ||
