SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-1H COSY | 1.0 mM TdPI-short | 90% H2O/10% D2O 0.1% TFA | 2.0 | ambient | 298 | ||
| 2 | 2D 1H-1H NOESY | 1.0 mM TdPI-short | 90% H2O/10% D2O 0.1% TFA | 2.0 | ambient | 298 | ||
| 3 | 2D 1H-1H TOCSY | 1.0 mM TdPI-short | 90% H2O/10% D2O 0.1% TFA | 2.0 | ambient | 298 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| molecular dynamics, torsion angle dynamics | CYANA | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | target function |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (fewest violations) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | structure solution | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
| 2 | refinement | Amber | 9.0 | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm |
| 3 | chemical shift assignment | NMRView | 5.0.20 | Johnson, One Moon Scientific |
| 4 | data analysis | NMRView | 5.0.20 | Johnson, One Moon Scientific |
| 5 | peak picking | NMRView | 5.0.20 | Johnson, One Moon Scientific |
| 6 | collection | TopSpin | 1.3 | Bruker Biospin |
| 7 | processing | TopSpin | 1.3 | Bruker Biospin |
| 8 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich | |
