SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 0.8 mM [U-100% 15N] entity_1 | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 308 | |
2 | 2D 1H-13C HSQC | 0.8 mM [U-100% 13C; U-100% 15N] entity_1 | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 308 | |
3 | 2D 1H-1H NOESY | 0.8 mM [U-100% 15N] entity_1 | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 308 | |
4 | 3D CBCA(CO)NH | 0.8 mM [U-100% 13C; U-100% 15N] entity_1 | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 308 | |
5 | 3D HNCO | 0.8 mM [U-100% 13C; U-100% 15N] entity_1 | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 308 | |
6 | 3D HNCA | 0.8 mM [U-100% 13C; U-100% 15N] entity_1 | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 308 | |
7 | 3D HCCH-TOCSY | 0.8 mM [U-100% 13C; U-100% 15N] entity_1 | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 308 | |
8 | 3D 1H-15N NOESY | 0.8 mM [U-100% 15N] entity_1 | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 308 | |
9 | 3D 1H-13C NOESY | 0.8 mM [U-100% 13C; U-100% 15N] entity_1 | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 308 | |
10 | 3D HN(CO)CA | 0.8 mM [U-100% 13C; U-100% 15N] entity_1 | 90% H2O/10% D2O | 0.05 | 7.2 | ambient | 308 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AVANCE | 500 |
2 | Bruker | AVANCE | 900 |
3 | Bruker | AVANCE | 600 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
molecular dynamics | XwinNMR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 350 |
Conformers Submitted Total Number | 31 |
Representative Model | 1 (minimized average structure) |
Additional NMR Experimental Information | |
---|---|
Details | the structure was determined using NOE and dihedral angle constrains |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 3.6 | Bruker Biospin |
2 | processing | XwinNMR | 3.6 | Bruker Biospin |
3 | data analysis | CARA | 2.0 | Keller and Wuthrich |
4 | chemical shift assignment | CARA | 2.0 | Keller and Wuthrich |
5 | peak picking | CARA | 2.0 | Keller and Wuthrich |
6 | structure solution | DYANA | 1.5 | Guntert, Braun and Wuthrich |
7 | refinement | Amber | 8.0 | Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Koll |