X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP6.52981.6 M ammonium sulphate, 0.1 M MES monohydrate, 10% v/v 1,4-dioxane, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.0138.65

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 35.428α = 90
b = 45.731β = 90
c = 107.715γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDBruker Platinum 135Helios2008-09-24MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODEBRUKER AXS MICROSTAR1.5418

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.653.8696.80.04324.875.122316823168
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.61.6594.80.14077.162.361580

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSIRASTHROUGHOUT1.6252125721257115093.850.167430.167430.165820.19624RANDOM9.366
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.170.26-0.43
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.994
r_dihedral_angle_4_deg24.949
r_dihedral_angle_3_deg13.387
r_dihedral_angle_1_deg8.095
r_scangle_it4.518
r_scbond_it2.938
r_mcangle_it2.5
r_angle_refined_deg1.98
r_mcbond_it1.585
r_angle_other_deg1.015
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.994
r_dihedral_angle_4_deg24.949
r_dihedral_angle_3_deg13.387
r_dihedral_angle_1_deg8.095
r_scangle_it4.518
r_scbond_it2.938
r_mcangle_it2.5
r_angle_refined_deg1.98
r_mcbond_it1.585
r_angle_other_deg1.015
r_mcbond_other0.587
r_chiral_restr0.131
r_bond_refined_d0.023
r_gen_planes_refined0.013
r_gen_planes_other0.002
r_bond_other_d0.001
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1404
Nucleic Acid Atoms
Solvent Atoms217
Heterogen Atoms5

Software

Software
Software NamePurpose
PROTEUM PLUSdata collection
SHELXSphasing
REFMACrefinement
SAINTdata reduction
PROTEUM PLUSdata scaling