Solution NMR of the specialized apo-acyl carrier protein (RPA2022) from Rhodopseudomonas palustris, refined without RDCs. Northeast Structural Genomics Consortium Target RpR324
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 1D | 20 mM MES, 200 mM NaCl, 5 mM CaCl, 0.02 % NaN3, 10 mM DTT, 5 uM DSS, 1.4 mM [U-100% 13C; U-100% 15N] protein | 95% H2O/5% D2O | 200 mM | 6.5 | 1 atm | 298 | Bruker AVANCE III 850 |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE III | 850 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | from constraints | CYANA |
| simulated annealing | CNS water refinement | CNS |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (medoid) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 2 | structure calculation | CYANA | 3.98.13 | Guntert, Mumenthaler and Wuthrich |
| 3 | data analysis | PdbStat | 5.20 | Tejero, Snyder, Mao, Aramini, Montelione |
| 4 | peak picking | NMRFAM-SPARKY | 3.19 | Lee, Westler, Bahrami, Eghbalnia, Markley |
| 5 | refinement | CNS | 1.3 | Brunger, Adams, Clore, Gros, Nilges and Read |
