Ligand validation:1QGD

TPP: THIAMINE DIPHOSPHATE

TPP is a Ligand Of Interest in 1QGD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
1QGD_TPP_B_670	91%	20%	0.087	0.975	1.01	2.31	1	6	1	0	100%	1
1QGD_TPP_A_670	91%	13%	0.091	0.976	1.29	2.63	2	11	0	0	100%	1
5HHT_TPP_B_711	96%	19%	0.067	0.975	1.86	1.62	3	6	1	0	100%	1
2R5N_TPP_A_672	76%	12%	0.103	0.939	2.1	1.95	5	8	0	0	100%	1
2AG1_TPP_D_632	100%	1%	0.016	0.998	6	2.06	5	8	0	0	100%	1
9BT4_TPP_C_302	100%	48%	0.018	0.998	1.1	0.92	2	2	1	0	100%	1
4KXW_TPP_A_1015	100%	39%	0.032	0.998	1.23	1.16	2	4	1	0	100%	1
4KGD_TPP_A_704	100%	22%	0.035	0.997	1.74	1.51	4	7	0	0	100%	0.97
4MPJ_TPP_A_604	100%	28%	0.031	0.991	1.34	1.53	3	6	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.