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1WPL
|
pdb_00001wpl
ZN
HBI
3PO
NA
HBI: 7,8-DIHYDROBIOPTERIN
Ligand Definition and Summary of HBI
HBI is a Ligand Of Interest in 1WPL designated by the RCSB
Help
Created with Raphaël 2.3.0
Worse
Geometry
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Worse
Experiment Data Fitting
Better
1WPL_HBI_F_1009
Click to see a 3D
electron density view
of this ligand instance
Created with Raphaël 2.3.0
Worse
Geometry
Better
Worse
Experiment Data Fitting
Better
1WPL_HBI_F_1009
Click to see a 3D
electron density view
of this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
Identifier
Ranking for goodness of fit
Ranking for geometry
Real space R factor
Real space correlation coefficient
RMSZ-bond-length
RMSZ-bond-angle
Outliers of bond length
Outliers of bond angle
Atomic clashes
Stereochemical errors
Model completeness
Average occupancy
1WPL_HBI_F_1009
75%
16%
0.126
0.961
2.64
1.09
7
-
0
0
100%
1
1WPL_HBI_G_1006
74%
17%
0.138
0.969
2.67
1.01
7
-
0
0
100%
1
1WPL_HBI_H_1007
74%
15%
0.139
0.969
2.66
1.14
7
-
0
0
100%
1
1WPL_HBI_I_1008
72%
14%
0.141
0.966
2.74
1.14
7
-
0
0
100%
1
1WPL_HBI_A_1004
69%
18%
0.149
0.965
2.58
1.03
7
-
0
0
100%
1
1WPL_HBI_A_1003
69%
15%
0.141
0.955
2.7
1.1
8
-
0
0
100%
1
1WPL_HBI_D_1002
69%
15%
0.15
0.964
2.65
1.13
6
-
0
0
100%
1
1WPL_HBI_F_1010
68%
15%
0.146
0.957
2.68
1.12
7
-
0
0
100%
1
1WPL_HBI_C_1001
67%
16%
0.154
0.962
2.52
1.18
5
-
0
0
100%
1
1WPL_HBI_B_1005
60%
16%
0.172
0.959
2.65
1.09
7
-
0
0
100%
1
5JK5_HBI_B_503
90%
6%
0.067
0.95
2.26
2.68
3
5
0
0
100%
1
5ZFK_HBI_B_600
89%
10%
0.075
0.955
1.99
2.27
3
3
0
0
100%
1
2G6I_HBI_A_760
89%
2%
0.093
0.972
3.31
3.31
5
7
1
0
100%
1
2G6N_HBI_A_760
88%
2%
0.095
0.97
3.1
3.32
5
6
1
0
100%
1
2G6L_HBI_A_760
85%
2%
0.105
0.971
3.24
3.35
5
7
1
0
100%
1
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