2AZ3 | pdb_00002az3


CDP: CYTIDINE-5'-DIPHOSPHATE

CDP is a Ligand Of Interest in 2AZ3 designated by the RCSB
Help


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2AZ3_CDP_C_1300Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2AZ3_CDP_C_1300Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2AZ3_CDP_C_1300 84% 35% 0.112 0.9751.28 1.29 3 530100%1
2AZ3_CDP_B_1200 84% 31% 0.106 0.9681.18 1.57 1 700100%1
2AZ3_CDP_A_1100 82% 25% 0.109 0.9631.38 1.66 3 900100%1
2AZ3_CDP_E_1500 75% 31% 0.095 0.9271.33 1.41 3 720100%1
2AZ3_CDP_F_1600 71% 32% 0.111 0.931.28 1.41 3 400100%1
2AZ3_CDP_D_1400 62% 36% 0.127 0.9171.26 1.27 3 420100%1
2AZ3_CDP_H_1800 58% 31% 0.118 0.8971.27 1.48 2 400100%1
2AZ3_CDP_I_1900 34% 37% 0.192 0.8751.23 1.23 2 300100%1
2AZ3_CDP_G_1700 23% 29% 0.222 0.8451.29 1.54 3 610100%1
6SDK_CDP_C_301 100% 5% 0.043 0.9873.72 1.58 12 600100%1
3BOS_CDP_B_300 100% 55% 0.046 0.9880.92 0.81 1 100100%1
8VHP_CDP_D_809 98% 52% 0.051 0.9750.89 0.96 - 220100%1
2VBU_CDP_A_1133 96% 45% 0.078 0.9890.89 1.22 - 300100%1
1ORR_CDP_B_1301 96% 34% 0.06 0.971.28 1.32 3 600100%1