Ligand validation:2PDY

FID: (2S,4S)-2-AMINOFORMYL-6-FLUORO-SPIRO[CHROMAN-4,4'-IMIDAZOLIDINE]-2',5'-DIONE

FID is a Ligand Of Interest in 2PDY designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2PDY_FID_A_600	78%	28%	0.092	0.933	0.6	2.23	-	8	0	0	100%	1
2PF8_FID_A_321	100%	0%	0.042	0.994	2.16	7.81	3	12	2	0	100%	0.38
1PWM_FID_A_1320	100%	46%	0.045	0.993	0.65	1.42	-	5	0	0	100%	1
2PFH_FID_A_321	100%	13%	0.05	0.994	0.83	3.04	1	11	3	0	100%	0.2
2PEV_FID_A_321	100%	1%	0.048	0.99	1.98	6.73	3	8	3	0	100%	0.57
2PDW_FID_A_600	87%	33%	0.085	0.957	0.71	1.91	1	7	0	0	100%	1
4GAB_FID_A_402	96%	1%	0.057	0.967	3.74	4.81	3	7	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.