2VT4
SOG: octyl 1-thio-beta-D-glucopyranoside
SOG is a Ligand Of Interest in 2VT4 designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
2VT4_SOG_A_403 | 67% | 60% | 0.141 | 0.95 | 0.59 | 0.92 | - | - | 0 | 0 | 100% | 1 |
2VT4_SOG_D_403 | 48% | 25% | 0.171 | 0.916 | 0.63 | 2.36 | - | 7 | 4 | 0 | 100% | 1 |
2VT4_SOG_C_402 | 22% | 37% | 0.207 | 0.824 | 0.74 | 1.72 | 1 | 3 | 1 | 0 | 100% | 1 |
2VT4_SOG_B_402 | 17% | 27% | 0.235 | 0.815 | 0.94 | 1.98 | 1 | 4 | 0 | 0 | 100% | 1 |
2VT4_SOG_B_404 | 16% | 54% | 0.248 | 0.908 | 0.61 | 1.15 | - | 1 | 2 | 0 | 50% | 0.5 |
2VT4_SOG_D_402 | 14% | 30% | 0.257 | 0.808 | 1.26 | 1.54 | 3 | 2 | 0 | 0 | 100% | 1 |
2VT4_SOG_C_404 | 12% | 47% | 0.258 | 0.788 | 0.93 | 1.1 | 1 | 3 | 2 | 0 | 100% | 1 |
2VT4_SOG_A_402 | 12% | 10% | 0.267 | 0.796 | 1.97 | 2.35 | 6 | 8 | 1 | 0 | 100% | 1 |
2VT4_SOG_B_405 | 4% | 57% | 0.31 | 0.675 | 0.82 | 0.83 | 2 | 1 | 3 | 0 | 100% | 1 |
2VT4_SOG_A_405 | 2% | 44% | 0.484 | 0.787 | 1.06 | 1.12 | 2 | 3 | 4 | 0 | 100% | 1 |
2VT4_SOG_D_405 | 2% | 59% | 0.445 | 0.705 | 0.56 | 1 | - | - | 5 | 0 | 100% | 1 |
2VT4_SOG_C_405 | 1% | 47% | 0.466 | 0.645 | 0.68 | 1.34 | - | 3 | 8 | 0 | 100% | 1 |
2YCY_SOG_A_1360 | 22% | 52% | 0.303 | 0.923 | 0.63 | 1.2 | - | 2 | 3 | 0 | 100% | 1 |
2YCX_SOG_B_1362 | 5% | 34% | 0.342 | 0.741 | 1.35 | 1.28 | 2 | 3 | 1 | 0 | 100% | 1 |
2YCZ_SOG_B_1360 | 2% | 40% | 0.43 | 0.672 | 1.25 | 1.08 | 2 | 2 | 0 | 0 | 100% | 1 |
6TOS_SOG_B_406 | 70% | 81% | 0.109 | 0.927 | 0.31 | 0.51 | - | - | 0 | 0 | 100% | 1 |
6YU6_SOG_A_507 | 64% | 91% | 0.138 | 0.937 | 0.18 | 0.39 | - | - | 3 | 0 | 100% | 1 |
6TOT_SOG_A_405 | 55% | 44% | 0.159 | 0.929 | 0.91 | 1.24 | 1 | 1 | 0 | 0 | 100% | 1 |
5G53_SOG_A_501 | 54% | 39% | 0.17 | 0.937 | 1.01 | 1.37 | 1 | 3 | 0 | 0 | 100% | 1 |
3VHZ_SOG_A_430 | 53% | 27% | 0.144 | 0.906 | 1.73 | 1.21 | 5 | 2 | 0 | 0 | 100% | 1 |