3D1: (2R,3S,5R)-5-(6-amino-9H-purin-9-yl)-tetrahydro-2-(hydroxymethyl)furan-3-ol
3D1 is a Ligand Of Interest in 2ZI3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2ZI3_3D1_B_302 | 67% | 5% | 0.136 | 0.944 | 2.77 | 2.65 | 3 | 4 | 1 | 0 | 100% | 1 |
2ZI3_3D1_A_302 | 61% | 4% | 0.169 | 0.958 | 2.85 | 2.65 | 2 | 4 | 3 | 0 | 100% | 1 |
2ZI6_3D1_A_1302 | 95% | 5% | 0.068 | 0.973 | 2.23 | 3.02 | 3 | 5 | 1 | 0 | 100% | 1 |
5M67_3D1_C_503 | 96% | 19% | 0.064 | 0.971 | 1.63 | 1.83 | 5 | 5 | 3 | 0 | 100% | 1 |
6ZPA_3D1_A_201 | 96% | 60% | 0.073 | 0.98 | 0.69 | 0.83 | - | 1 | 0 | 0 | 100% | 1 |
6ZPB_3D1_A_201 | 94% | 62% | 0.067 | 0.967 | 0.69 | 0.75 | - | 1 | 0 | 0 | 100% | 1 |
4Q7F_3D1_A_603 | 69% | 36% | 0.125 | 0.939 | 1.02 | 1.47 | 1 | 3 | 0 | 0 | 100% | 1 |
3IAR_3D1_A_501 | 69% | 43% | 0.105 | 0.918 | 1.11 | 1.11 | 1 | 2 | 0 | 0 | 100% | 1 |