SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

SQD is a Ligand Of Interest in 4IL6 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4IL6_SQD_c_518 53% 42% 0.144 0.9040.98 1.26 2 600100%1
4IL6_SQD_A_1011 52% 42% 0.148 0.9060.96 1.29 2 800100%1
4IL6_SQD_D_408 36% 33% 0.18 0.911.11 1.55 2 90080%0.7963
4IL6_SQD_a_401 33% 45% 0.162 0.8410.98 1.13 2 400100%1
4IL6_SQD_A_1016 29% 46% 0.166 0.8230.97 1.13 2 400100%1
4IL6_SQD_B_620 14% 47% 0.238 0.7850.98 1.07 2 500100%0.5
4IL6_SQD_b_623 10% 46% 0.25 0.7520.96 1.11 2 500100%0.5
4IL6_SQD_f_102 8% 37% 0.275 0.7891.14 1.34 3 60080%0.7963
5V2C_SQD_a_413 94% 21% 0.075 0.9761.12 2.14 4 1200100%1
5GTI_SQD_A_409 91% 29% 0.066 0.950.98 1.84 3 1300100%1
6DHE_SQD_A_412 78% 20% 0.113 0.9611.05 2.27 5 140096%0.963
8IRC_SQD_a_411 77% 29% 0.119 0.960.96 1.83 3 1300100%1
8IR5_SQD_a_411 76% 31% 0.123 0.9580.95 1.77 3 1300100%1
8IRF_SQD_a_410 76% 29% 0.125 0.960.96 1.83 3 1300100%0.49