4L9S | pdb_00004l9s


GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 4L9S designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4L9S_GDP_A_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4L9S_GDP_A_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4L9S_GDP_A_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4L9S_GDP_A_201 97% 50% 0.067 0.980.98 0.94 1 300100%1
8CNJ_GDP_B_201 100% 56% 0.04 0.9920.91 0.77 1 -00100%1
5E95_GDP_A_201 99% 49% 0.054 0.9880.95 1.03 1 100100%1
6MQT_GDP_B_201 99% 66% 0.055 0.9850.83 0.5 2 -00100%0.998
1ZVQ_GDP_A_180 97% 45% 0.064 0.9820.93 1.17 1 300100%1
8CNN_GDP_A_206 97% 52% 0.067 0.9850.99 0.86 1 100100%1
1TVK_GDP_B_1500 100% 23% 0.012 0.9992.28 0.95 3 280100%1
8QEG_GDP_A_401 100% 51% 0.031 0.9931.02 0.87 3 100100%1
8QEH_GDP_A_405 100% 55% 0.03 0.9930.89 0.85 1 100100%1
9BAJ_GDP_A_203 100% 41% 0.032 0.9941.22 1.1 2 210100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1