Ligand validation:4YKM

RET: RETINAL

RET is a Ligand Of Interest in 4YKM designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4YKM_RET_A_201	78%	37%	0.084	0.927	0.71	1.75	-	6	0	0	100%	0.9524
4YKM_RET_B_201	64%	35%	0.104	0.9	0.69	1.85	-	9	0	0	100%	0.9524
6MOV_RET_A_201	74%	62%	0.091	0.919	0.78	0.68	1	-	0	0	100%	0.9524
6NNX_RET_A_201	71%	60%	0.117	0.937	0.99	0.54	1	-	0	0	100%	0.9524
4YFQ_RET_A_201	70%	39%	0.1	0.917	0.77	1.58	-	4	0	0	100%	0.9524
6MQX_RET_A_203	63%	60%	0.16	0.956	0.76	0.79	1	-	1	0	100%	0.9524
4YKO_RET_B_201	62%	37%	0.1	0.89	0.64	1.82	-	8	0	0	100%	0.9524
4OV0_RET_A_301	100%	8%	0.027	0.992	0.76	3.77	-	15	4	0	100%	0.9524
3UTY_RET_A_301	100%	5%	0.028	0.992	2.48	2.7	6	12	2	0	100%	0.9524
3UTX_RET_B_301	100%	6%	0.042	0.988	2.42	2.7	5	12	4	0	100%	0.9524
7XJE_RET_A_301	99%	6%	0.048	0.983	1.99	2.98	4	14	1	0	100%	0.9524
5G28_RET_A_1268	97%	23%	0.051	0.968	1.29	1.84	3	5	0	0	100%	0.9524

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.