4Z1M | pdb_00004z1m


ADP: ADENOSINE-5'-DIPHOSPHATE

ADP is a Ligand Of Interest in 4Z1M designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4Z1M_ADP_F_501Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4Z1M_ADP_F_501Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4Z1M_ADP_F_501Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4Z1M_ADP_F_501 39% 38% 0.236 0.9461.01 1.4 1 400100%1
4Z1M_ADP_D_600 31% 38% 0.242 0.9121 1.43 1 400100%1
1H8E_ADP_F_600 97% 46% 0.068 0.9861 1.07 2 400100%1
1E1R_ADP_D_600 93% 43% 0.093 0.9871.07 1.13 2 210100%1
2JJ1_ADP_K_1476 91% 44% 0.093 0.980.96 1.21 2 510100%1
1W0J_ADP_C_1511 88% 46% 0.116 0.9930.9 1.19 1 110100%1
1E79_ADP_B_600 87% 54% 0.103 0.9770.86 0.91 - 100100%1
3KB1_ADP_A_301 100% 22% 0.021 0.9962.06 1.21 6 410100%1
3TW6_ADP_B_2000 100% 44% 0.019 0.9970.83 1.34 - 430100%1
5GZA_ADP_A_401 100% 2% 0.019 0.9973.36 3.39 13 1110100%1
5KHW_ADP_A_1201 100% 41% 0.023 0.9951.1 1.2 1 200100%1
8VZA_ADP_A_603 100% 37% 0.024 0.9950.96 1.51 1 500100%1