GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 4Z87 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4Z87_GDP_D_602 91% 41% 0.088 0.9730.96 1.31 1 430100%1
4Z87_GDP_C_603 82% 39% 0.099 0.9541.06 1.31 1 410100%1
4Z87_GDP_B_602 75% 44% 0.125 0.9590.97 1.17 1 200100%1
4Z87_GDP_A_603 75% 44% 0.131 0.9640.98 1.17 1 340100%1
4Z87_GDP_B_603 72% 40% 0.134 0.9590.94 1.39 1 510100%1
4Z87_GDP_A_602 71% 42% 0.126 0.9480.95 1.3 1 400100%1
4Z87_GDP_C_602 69% 41% 0.114 0.9271.08 1.2 1 300100%1
4Z87_GDP_D_601 66% 40% 0.113 0.9161.05 1.28 1 320100%1
4Z87_GDP_A_604 46% 39% 0.147 0.8811.05 1.34 1 530100%0.51
4Z87_GDP_D_603 35% 39% 0.14 0.8261.07 1.29 1 410100%0.55
4Z87_GDP_B_604 31% 40% 0.149 0.8150.98 1.34 1 410100%1
4Z87_GDP_C_604 7% 42% 0.279 0.7311.02 1.22 1 210100%1
5TC3_GDP_A_602 63% 13% 0.15 0.9452.33 1.63 8 710100%1
6RPU_GDP_A_602 21% 45% 0.205 0.8130.94 1.19 1 230100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1
2CXX_GDP_B_2401 100% 29% 0.031 0.9891.26 1.57 1 300100%1
4LUC_GDP_A_204 100% 40% 0.036 0.9921.22 1.11 2 200100%1
5YMX_GDP_A_301 100% 54% 0.038 0.9940.92 0.85 1 -20100%1
8V3A_GDP_B_201 100% 42% 0.036 0.9911.1 1.14 1 200100%1