GDN: GLUTATHIONE S-(2,4 DINITROBENZENE)
GDN is a Ligand Of Interest in 4ZBB designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
4ZBB_GDN_D_300 | 87% | 38% | 0.097 | 0.969 | 1.55 | 0.89 | 3 | 1 | 0 | 0 | 100% | 1 |
4ZBB_GDN_B_300 | 86% | 37% | 0.09 | 0.959 | 1.56 | 0.91 | 4 | 1 | 1 | 0 | 100% | 1 |
4ZBB_GDN_C_300 | 81% | 37% | 0.102 | 0.953 | 1.57 | 0.92 | 3 | 1 | 1 | 0 | 100% | 1 |
4ZBB_GDN_A_300 | 80% | 38% | 0.1 | 0.947 | 1.55 | 0.88 | 3 | 1 | 0 | 0 | 100% | 1 |
4ZBB_GDN_C_301 | 14% | 36% | 0.27 | 0.826 | 1.59 | 0.95 | 5 | 1 | 6 | 0 | 100% | 1 |
4ZBB_GDN_A_301 | 10% | 34% | 0.282 | 0.782 | 1.58 | 1.03 | 5 | 1 | 4 | 0 | 100% | 1 |
4ZBB_GDN_B_301 | 8% | 34% | 0.281 | 0.76 | 1.57 | 1.03 | 4 | 1 | 9 | 0 | 100% | 1 |
4ZBB_GDN_D_301 | 5% | 33% | 0.334 | 0.752 | 1.61 | 1.04 | 5 | 2 | 7 | 0 | 100% | 1 |
6F4F_GDN_B_301 | 84% | 13% | 0.096 | 0.957 | 1.72 | 2.2 | 5 | 11 | 0 | 0 | 100% | 1 |
1XWK_GDN_A_218 | 77% | 40% | 0.102 | 0.941 | 1.12 | 1.23 | 1 | 3 | 1 | 0 | 100% | 1 |
1VF3_GDN_B_3600 | 65% | 19% | 0.122 | 0.923 | 1.89 | 1.61 | 9 | 4 | 0 | 0 | 100% | 1 |
18GS_GDN_A_210 | 61% | 10% | 0.134 | 0.924 | 2.27 | 2.09 | 7 | 11 | 0 | 0 | 100% | 1 |