4Z87
GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4Z87 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4Z87_GDP_D_602 | 91% | 41% | 0.088 | 0.973 | 0.96 | 1.31 | 1 | 4 | 3 | 0 | 100% | 1 |
| 4Z87_GDP_C_603 | 82% | 39% | 0.099 | 0.954 | 1.06 | 1.31 | 1 | 4 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_B_602 | 75% | 44% | 0.125 | 0.959 | 0.97 | 1.17 | 1 | 2 | 0 | 0 | 100% | 1 |
| 4Z87_GDP_A_603 | 75% | 44% | 0.131 | 0.964 | 0.98 | 1.17 | 1 | 3 | 4 | 0 | 100% | 1 |
| 4Z87_GDP_B_603 | 72% | 40% | 0.134 | 0.959 | 0.94 | 1.39 | 1 | 5 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_A_602 | 71% | 42% | 0.126 | 0.948 | 0.95 | 1.3 | 1 | 4 | 0 | 0 | 100% | 1 |
| 4Z87_GDP_C_602 | 69% | 41% | 0.114 | 0.927 | 1.08 | 1.2 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4Z87_GDP_D_601 | 66% | 40% | 0.113 | 0.916 | 1.05 | 1.28 | 1 | 3 | 2 | 0 | 100% | 1 |
| 4Z87_GDP_A_604 | 46% | 39% | 0.147 | 0.881 | 1.05 | 1.34 | 1 | 5 | 3 | 0 | 100% | 0.51 |
| 4Z87_GDP_D_603 | 35% | 39% | 0.14 | 0.826 | 1.07 | 1.29 | 1 | 4 | 1 | 0 | 100% | 0.55 |
| 4Z87_GDP_B_604 | 31% | 40% | 0.149 | 0.815 | 0.98 | 1.34 | 1 | 4 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_C_604 | 7% | 42% | 0.279 | 0.731 | 1.02 | 1.22 | 1 | 2 | 1 | 0 | 100% | 1 |
| 5TC3_GDP_A_602 | 63% | 13% | 0.15 | 0.945 | 2.33 | 1.63 | 8 | 7 | 1 | 0 | 100% | 1 |
| 6RPU_GDP_A_602 | 21% | 45% | 0.205 | 0.813 | 0.94 | 1.19 | 1 | 2 | 3 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 5KY2_GDP_A_403 | 100% | 48% | 0.036 | 0.989 | 0.98 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
