5AGD | pdb_00005agd


MAN: alpha-D-mannopyranose

MAN is a Ligand Of Interest in 5AGD designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5AGD_MAN_B_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5AGD_MAN_B_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5AGD_MAN_B_500 96% 37% 0.061 0.9670.54 1.89 - 400100%0.5
5AGD_MAN_A_500 89% 66% 0.079 0.9560.41 0.9 - 100100%0.5
5O2X_MAN_A_311 100% 66% 0.023 0.9950.37 0.94 - 100100%1
7C3C_MAN_A_401 100% 65% 0.039 0.9880.72 0.62 - -00100%1
1GAI_MAN_A_480 100% 75% 0.043 0.9860.45 0.53 - -00100%1
5M03_MAN_A_402 100% 59% 0.034 0.9890.56 0.99 - -0092%1
1GAH_MAN_A_479 99% 76% 0.05 0.9890.44 0.5 - -00100%1