DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 5WS6 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5WS6_DGD_h_103 | 92% | 53% | 0.065 | 0.968 | 0.86 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5WS6_DGD_H_102 | 91% | 55% | 0.069 | 0.966 | 0.82 | 0.93 | 3 | 4 | 0 | 0 | 94% | 0.9394 |
5WS6_DGD_c_520 | 91% | 50% | 0.067 | 0.963 | 0.82 | 1.09 | 2 | 3 | 0 | 0 | 94% | 0.9394 |
5WS6_DGD_C_517 | 89% | 49% | 0.072 | 0.961 | 0.81 | 1.16 | 2 | 5 | 0 | 0 | 94% | 0.9394 |
5WS6_DGD_c_518 | 89% | 50% | 0.068 | 0.956 | 0.83 | 1.09 | 2 | 4 | 0 | 0 | 94% | 0.9394 |
5WS6_DGD_C_519 | 88% | 54% | 0.071 | 0.958 | 0.82 | 0.94 | 3 | 4 | 0 | 0 | 94% | 0.9394 |
5WS6_DGD_C_518 | 83% | 51% | 0.08 | 0.95 | 0.86 | 1.02 | 2 | 6 | 0 | 0 | 94% | 0.9394 |
5WS6_DGD_c_519 | 82% | 53% | 0.081 | 0.945 | 0.87 | 0.94 | 2 | 4 | 0 | 0 | 94% | 0.9394 |
5GTI_DGD_h_103 | 96% | 52% | 0.05 | 0.967 | 0.89 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 0.9394 |
7YQ7_DGD_C_518 | 87% | 51% | 0.084 | 0.967 | 0.83 | 1.07 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
8IR5_DGD_C_515 | 86% | 47% | 0.092 | 0.97 | 0.81 | 1.21 | 2 | 8 | 0 | 0 | 94% | 0.9394 |
8IRC_DGD_C_517 | 85% | 47% | 0.096 | 0.973 | 0.83 | 1.2 | 2 | 8 | 0 | 0 | 94% | 0.9394 |