AMP: ADENOSINE MONOPHOSPHATE
AMP is a Ligand Of Interest in 6YMI designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6YMI_AMP_M_102 | 65% | 45% | 0.155 | 0.958 | 0.89 | 1.24 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_A_103 | 64% | 46% | 0.141 | 0.941 | 0.89 | 1.19 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_F_102 | 58% | 45% | 0.165 | 0.944 | 0.88 | 1.25 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_N_101 | 43% | 47% | 0.169 | 0.891 | 0.85 | 1.18 | 1 | 2 | 1 | 0 | 100% | 1 |
6YMI_AMP_I_102 | 41% | 46% | 0.174 | 0.887 | 0.87 | 1.19 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_C_102 | 40% | 46% | 0.179 | 0.89 | 0.89 | 1.18 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_O_201 | 37% | 46% | 0.193 | 0.893 | 0.88 | 1.18 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_G_101 | 32% | 47% | 0.212 | 0.884 | 0.86 | 1.16 | 1 | 2 | 3 | 0 | 100% | 1 |
6YMI_AMP_A_102 | 26% | 47% | 0.228 | 0.867 | 0.85 | 1.17 | 1 | 2 | 3 | 0 | 100% | 1 |
3LOQ_AMP_A_271 | 100% | 45% | 0.039 | 0.987 | 0.82 | 1.3 | - | 2 | 2 | 0 | 100% | 1 |
7SNB_AMP_A_303 | 100% | 55% | 0.045 | 0.993 | 0.75 | 0.98 | - | 1 | 0 | 0 | 100% | 0.783 |
4RDH_AMP_C_301 | 100% | 23% | 0.039 | 0.983 | 1.37 | 1.79 | 3 | 6 | 0 | 0 | 100% | 1 |
3CLT_AMP_C_1262 | 100% | 40% | 0.046 | 0.987 | 0.91 | 1.4 | 1 | 4 | 0 | 0 | 100% | 1 |
5VEO_AMP_A_524 | 100% | 40% | 0.046 | 0.987 | 0.86 | 1.47 | - | 3 | 1 | 0 | 100% | 1 |