GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 7XPS designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
7XPS_GDP_B_401 | 15% | 44% | 0.25 | 0.809 | 0.93 | 1.22 | 1 | 3 | 0 | 0 | 100% | 1 |
7XPS_GDP_A_401 | 6% | 44% | 0.31 | 0.737 | 0.92 | 1.22 | 1 | 3 | 0 | 0 | 100% | 1 |
7YUA_GDP_C_401 | 51% | 9% | 0.15 | 0.902 | 2.63 | 1.83 | 8 | 5 | 2 | 0 | 100% | 1 |
7XPR_GDP_B_401 | 2% | 42% | 0.349 | 0.612 | 0.93 | 1.31 | 1 | 4 | 1 | 0 | 100% | 1 |
1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
8V3A_GDP_B_201 | 100% | 42% | 0.036 | 0.991 | 1.1 | 1.14 | 1 | 2 | 0 | 0 | 100% | 1 |