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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Bayer, E.A."

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Search Summary

This query matches 47 Structures.

Refinements

Structure Determination Methodology

experimental (47)

Scientific Name of Source Organism

	Acetivibrio thermocellus (9)
	Acetivibrio thermocellus ATCC 27405 (7)
	Gallus gallus (7)
	Streptomyces avidinii (7)
	Acetivibrio cellulolyticus (4)
	Clostridium perfringens (3)
	Ruminiclostridium cellulolyticum (3)
	Acetivibrio clariflavus (2)
	Pseudobacteroides cellulosolvens (2)
	Acetivibrio thermocellus YS (1)

More...

Taxonomy

	Bacteria (39)
	Eukaryota (7)
	Archaea (1)

Experimental Method

	X-RAY DIFFRACTION (46)
	SOLUTION NMR (1)

Polymer Entity Type

Protein (47)

Refinement Resolution (Å)

	1.0 - 1.5 (12)
	1.5 - 2.0 (20)
	2.0 - 2.5 (9)
	2.5 - 3.0 (5)

Release Date

	1995 - 1999 (1)
	2000 - 2004 (13)
	2005 - 2009 (14)
	2010 - 2014 (16)
	2015 - 2019 (3)

Enzyme Classification Name

Hydrolases (10)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Asymmetric (29)
	Dihedral (14)
	Cyclic (5)

SCOP Classification

	All beta proteins (40)
	Artifacts (14)
	All alpha proteins (4)

AllSelected

1 to 25 of 47 Structures

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1ANU \| pdb_00001anu	Download File View File

COHESIN-2 DOMAIN OF THE CELLULOSOME FROM CLOSTRIDIUM THERMOCELLUM

Shimon, L.J.W., Yaron, S., Shoham, Y., Lamed, R., Morag, E., Bayer, E.A., Frolow, F.

(1997) Structure 5: 381-390

Released	1997-07-23
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Acetivibrio thermocellus
Macromolecule	COHESIN-2 (protein)

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1G43 \| pdb_00001g43	Download File View File

CRYSTAL STRUCTURE OF A FAMILY IIIA CBD FROM CLOSTRIDIUM CELLULOLYTICUM

Shimon, L.J.W., Pages, S., Belaich, A., Belaich, J.-P., Bayer, E.A., Lamed, R., Shoham, Y., Frolow, F.

(2000) Acta Crystallogr D Biol Crystallogr 56: 1560-1568

Released	2000-12-01
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Ruminiclostridium cellulolyticum
Macromolecule	SCAFFOLDING PROTEIN (protein)
Unique Ligands	CA, ZN

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1I9H \| pdb_00001i9h	Download File View File

CORE STREPTAVIDIN-BNA COMPLEX

Livnah, O., Huberman, T., Wilchek, M., Bayer, E.A., Eisenberg-Domovich, Y.

(2001) J Biological Chem 276: 32031-32039

Released	2001-09-12
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Streptomyces avidinii
Macromolecule	STREPTAVIDIN (protein)
Unique Ligands	BNI

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1LCW \| pdb_00001lcw	Download File View File

streptavidin-homobiotin complex

Livnah, O., Pazy, Y., Bayer, E.A., Wilchek, M.

(2002) J Biological Chem 277: 30892-30900

Released	2002-11-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Streptomyces avidinii
Macromolecule	Streptavidin (protein)
Unique Ligands	SHM

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1LCZ \| pdb_00001lcz	Download File View File

streptavidin-BCAP complex

Livnah, O., Pazy, Y., Bayer, E.A., Wilchek, M.

(2002) J Biological Chem 277: 30892-30900

Released	2002-11-06
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Streptomyces avidinii
Macromolecule	Streptavidin (protein)
Unique Ligands	BH7

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1LDO \| pdb_00001ldo	Download File View File

avidin-norbioitn complex

Pazy, Y., Kulik, T., Bayer, E.A., Wilchek, M., Livnah, O.

(2002) J Biological Chem 277: 30892-30900

Released	2002-11-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Gallus gallus
Macromolecule	avidin (protein)
Unique Ligands	NAG, SNR

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1LDQ \| pdb_00001ldq	Download File View File

avidin-homobiotin complex

Pazy, Y., Kulik, T., Bayer, E.A., Wilchek, M., Livnah, O.

(2002) J Biological Chem 277: 30892-30900

Released	2002-11-06
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Gallus gallus
Macromolecule	Avidin (protein)
Unique Ligands	NAG, SHM

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1LEL \| pdb_00001lel	Download File View File

The avidin BCAP complex

Pazy, Y., Kulik, T., Bayer, E.A., Wilchek, M., Livnah, O.

(2002) J Biological Chem 277: 30892-30900

Released	2002-11-06
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Gallus gallus
Macromolecule	Avidin (protein)
Unique Ligands	BH7, NAG

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1NQM \| pdb_00001nqm	Download File View File

Structure of Savm-W120K, streptavidin mutant

Pazy, Y., Eisenberg-Domovich, Y., Laitinen, O.H., Kulomaa, M.S., Bayer, E.A., Wilchek, M., Livnah, O.

(2003) J Bacteriol 185: 4050-4056

Released	2003-07-15
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptomyces avidinii
Macromolecule	Streptavidin (protein)
Unique Ligands	BTN

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1NQN \| pdb_00001nqn	Download File View File

Structure of Avm-W110K (W110K mutant of avidin)

Pazy, Y., Eisenberg-Domovich, Y., Laitinen, O.H., Kulomaa, M.S., Bayer, E.A., Wilchek, M., Livnah, O.

(2003) J Bacteriol 185: 4050-4056

Released	2003-07-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Gallus gallus
Macromolecule	Avidin (protein)

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1QZN \| pdb_00001qzn	Download File View File

Crystal Structure Analysis of a type II cohesin domain from the cellulosome of Acetivibrio cellulolyticus

Frolow, F., Noach, I., Rosenheck, S., Lamed, R., Qi, X., Shimon, L.J.W., Bayer, E.A.

(2005) J Mol Biology 348: 1-12

Released	2004-09-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Acetivibrio cellulolyticus
Macromolecule	cellulosomal scaffoldin adaptor protein B (protein)

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1RXH \| pdb_00001rxh	Download File View File

Crystal structure of streptavidin mutant L124R (M1) complexed with biotinyl p-nitroanilide (BNI)

Eisenberg-Domovich, Y., Pazy, Y., Nir, O., Raboy, B., Bayer, E.A., Wilchek, M., Livnah, O.

(2004) Proc Natl Acad Sci U S A 101: 5916-5921

Released	2004-05-11
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Streptomyces avidinii
Macromolecule	Streptavidin (protein)
Unique Ligands	BNI

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1RXJ \| pdb_00001rxj	Download File View File

Crystal structure of streptavidin mutant (M2) where the L3,4 loop was replace by that of avidin

Eisenberg-Domovich, Y., Pazy, Y., Nir, O., Raboy, B., Bayer, E.A., Wilchek, M., Livnah, O.

(2004) Proc Natl Acad Sci U S A 101: 5916-5921

Released	2004-05-11
Method	X-RAY DIFFRACTION 1.14 Å
Organisms	Streptomyces avidinii
Macromolecule	Streptavidin (protein)
Unique Ligands	BNI

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1RXK \| pdb_00001rxk	Download File View File

crystal structure of streptavidin mutant (M3) a combination of M1+M2

Eisenberg-Domovich, Y., Pazy, Y., Nir, O., Raboy, B., Bayer, E.A., Wilchek, M., Livnah, O.

(2004) Proc Natl Acad Sci U S A 101: 5916-5921

Released	2004-05-11
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptomyces avidinii
Macromolecule	Streptavidin (protein)
Unique Ligands	BNI

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1TYJ \| pdb_00001tyj	Download File View File

Crystal Structure Analysis of type II Cohesin A11 from Bacteroides cellulosolvens

Noach, I., Frolow, F., Jakoby, H., Rosenheck, S., Shimon, L.J.W., Lamed, R., Bayer, E.A.

(2005) J Mol Biology 348: 1-12

Released	2005-04-26
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Pseudobacteroides cellulosolvens
Macromolecule	cellulosomal scaffoldin (protein)
Unique Ligands	EDO, MOH

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1Y52 \| pdb_00001y52	Download File View File

structure of insect cell (Baculovirus) expressed AVR4 (C122S)-biotin complex

Eisenberg-Domovich, Y., Hytonen, V.P., Wilchek, M., Bayer, E.A., Kulomaa, M.S., Livnah, O.

(2005) Acta Crystallogr D Biol Crystallogr 61: 528-538

Released	2005-05-24
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Gallus gallus
Macromolecule	Avidin-related protein 4/5 (protein)
Unique Ligands	BTN, NAG

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1Y53 \| pdb_00001y53	Download File View File

Crystal structure of bacterial expressed avidin related protein 4 (AVR4) C122S

Eisenberg-Domovich, Y., Hytonen, V.P., Wilchek, M., Bayer, E.A., Kulomaa, M.S., Livnah, O.

(2005) Acta Crystallogr D Biol Crystallogr 61: 528-538

Released	2005-05-24
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Gallus gallus
Macromolecule	Avidin-related protein 4/5 (protein)
Unique Ligands	FMT

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1Y55 \| pdb_00001y55	Download File View File

Crystal structure of the C122S mutant of E. Coli expressed avidin related protein 4 (AVR4)-biotin complex

Eisenberg-Domovich, Y., Hytonen, V.P., Wilchek, M., Bayer, E.A., Kulomaa, M.S., Livnah, O.

(2005) Acta Crystallogr D Biol Crystallogr 61: 528-538

Released	2005-05-24
Method	X-RAY DIFFRACTION 1 Å
Organisms	Gallus gallus
Macromolecule	Avidin-related protein 4/5 (protein)
Unique Ligands	BTN, FMT

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2JH2 \| pdb_00002jh2	Download File View File

X-ray crystal structure of a cohesin-like module from Clostridium perfringens

Chitayat, S., Gregg, K., Adams, J.J., Ficko-Blean, E., Bayer, E.A., Boraston, A.B., Smith, S.P.

(2008) J Mol Biology 375: 20

Released	2007-11-06
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Clostridium perfringens
Macromolecule	O-GLCNACASE NAGJ (protein)

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2JNK \| pdb_00002jnk	Download File View File

Solution structure of a dockerin-containing modular pair from a family 84 glycoside hydrolase

Chitayat, S., Adams, J.J., Bayer, E.A., Smith, S.P.

(2008) J Mol Biology 381: 1202-1212

Released	2008-01-29
Method	SOLUTION NMR
Organisms	Clostridium perfringens
Macromolecule	Hyalurononglucosaminidase (protein)

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2VN5 \| pdb_00002vn5	Download File View File

The Clostridium cellulolyticum dockerin displays a dual binding mode for its cohesin partner

Pinheiro, B.A., Prates, J.A.M., Proctor, M.R., Gilbert, H.J., Davies, G.J., Money, V.A., Martinez-Fleites, C., Bayer, E.A., Fontes, C.M.G.A., Fierobe, H.P.

(2008) J Biological Chem 283: 18422

Released	2008-05-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Ruminiclostridium cellulolyticum
Macromolecule	ENDOGLUCANASE A (protein) SCAFFOLDING PROTEIN (protein)
Unique Ligands	CA

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2VN6 \| pdb_00002vn6	Download File View File

The Clostridium cellulolyticum dockerin displays a dual binding mode for its cohesin partner

Pinheiro, B.A., Prates, J.A.M., Proctor, M.R., Gilbert, H.J., Davies, G.J., Money, V.A., Martinez-Fleites, C., Bayer, E.A., Fontes, C.M.G.A., Fierobe, H.P.

(2008) J Biological Chem 283: 18422

Released	2008-05-13
Method	X-RAY DIFFRACTION 1.49 Å
Organisms	Ruminiclostridium cellulolyticum
Macromolecule	ENDOGLUCANASE A (protein) SCAFFOLDING PROTEIN (protein)
Unique Ligands	CA

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2VO8 \| pdb_00002vo8	Download File View File

Cohesin module from Clostridium perfringens ATCC13124 family 33 glycoside hydrolase.

Gregg, K., Adams, J.J., Bayer, E.A., Boraston, A.B., Smith, S.P.

(2008) Proc Natl Acad Sci U S A 105: 12194

Released	2008-09-02
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Clostridium perfringens
Macromolecule	EXO-ALPHA-SIALIDASE (protein)

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2WNX \| pdb_00002wnx	Download File View File

3b' carbohydrate-binding module from the Cel9V glycoside hydrolase from Clostridium thermocellum

Petkun, S., Jindou, S., Shimon, L.J.W., Bayer, E.A., Lamed, R., Frolow, F.

(2010) Acta Crystallogr D Biol Crystallogr 66: 33

Released	2009-12-29
Method	X-RAY DIFFRACTION 1.31 Å
Organisms	Acetivibrio thermocellus
Macromolecule	GLYCOSIDE HYDROLASE, FAMILY 9 (protein)
Unique Ligands	CA, FMT, SO4

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2WO4 \| pdb_00002wo4	Download File View File

3b' carbohydrate-binding module from the Cel9V glycoside hydrolase from Clostridium thermocellum, in-house data

Petkun, S., Jindou, S., Shimon, L.J.W., Bayer, E.A., Lamed, R., Frolow, F.

(2010) Acta Crystallogr D Biol Crystallogr 66: 33

Released	2009-12-29
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Acetivibrio thermocellus
Macromolecule	GLYCOSIDE HYDROLASE, FAMILY 9 (protein)
Unique Ligands	CA, CL, SO4

1 to 25 of 47 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1ANU | pdb_00001anu

1G43 | pdb_00001g43

1I9H | pdb_00001i9h

1LCW | pdb_00001lcw

1LCZ | pdb_00001lcz

1LDO | pdb_00001ldo

1LDQ | pdb_00001ldq

1LEL | pdb_00001lel

1NQM | pdb_00001nqm

1NQN | pdb_00001nqn

1QZN | pdb_00001qzn

1RXH | pdb_00001rxh

1RXJ | pdb_00001rxj

1RXK | pdb_00001rxk

1TYJ | pdb_00001tyj

1Y52 | pdb_00001y52

1Y53 | pdb_00001y53

1Y55 | pdb_00001y55

2JH2 | pdb_00002jh2

2JNK | pdb_00002jnk

2VN5 | pdb_00002vn5

2VN6 | pdb_00002vn6

2VO8 | pdb_00002vo8

2WNX | pdb_00002wnx

2WO4 | pdb_00002wo4