RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Carr, P.D."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 111 Structures.

Refinements

Structure Determination Methodology

experimental (111)

Scientific Name of Source Organism

	synthetic construct (25)
	Agrobacterium tumefaciens (14)
	Lucilia cuprina (14)
	Escherichia coli (12)
	Pseudomonas putida (10)
	Klebsiella aerogenes (5)
	Paenarthrobacter aurescens (5)
	Mycolicibacterium smegmatis MC2 155 (4)
	Homo sapiens (3)
	Klebsiella pneumoniae (2)

More...

Taxonomy

	Bacteria (66)
	other sequences (25)
	Eukaryota (19)
	unclassified sequences (1)

Experimental Method

X-RAY DIFFRACTION (111)

Polymer Entity Type

Protein (111)

Refinement Resolution (Å)

	1.0 - 1.5 (5)
	1.5 - 2.0 (56)
	2.0 - 2.5 (34)
	2.5 - 3.0 (11)
	3.0 - 3.5 (5)

Release Date

	1995 - 1999 (6)
	2000 - 2004 (9)
	2005 - 2009 (26)
	2010 - 2014 (13)
	2015 - 2019 (57)

Enzyme Classification Name

	Hydrolases (53)
	Lyases (8)
	Transferases (7)
	Oxidoreductases (3)

Symmetry Type

	Asymmetric (74)
	Cyclic (46)
	Dihedral (7)

SCOP Classification

	Alpha and beta proteins (a+b) (19)
	Alpha and beta proteins (a/b) (34)
	All beta proteins (5)
	Artifacts (2)
	All alpha proteins (1)
	Small proteins (1)

AllSelected

1 to 25 of 111 Structures

Page 1 of 5

Sort by

Explore in 3D

1BIK \| pdb_00001bik	Download File View File

X-RAY STRUCTURE OF BIKUNIN FROM THE HUMAN INTER-ALPHA-INHIBITOR COMPLEX

Xu, Y., Carr, P.D., Guss, J.M., Ollis, D.L.

(1998) J Mol Biology 276: 955-966

Released	1999-03-16
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	BIKUNIN (protein)
Unique Ligands	NAG, SO4

Explore in 3D

1CIV \| pdb_00001civ	Download File View File

CHLOROPLAST NADP-DEPENDENT MALATE DEHYDROGENASE FROM FLAVERIA BIDENTIS

Carr, P.D., Ashton, A.R., Verger, D., Ollis, D.L.

(1999) Structure 7: 461-475

Released	2000-04-05
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Flaveria bidentis
Macromolecule	NADP-MALATE DEHYDROGENASE (protein)
Unique Ligands	NAP

Explore in 3D

1GGV \| pdb_00001ggv	Download File View File

CRYSTAL STRUCTURE OF THE C123S MUTANT OF DIENELACTONE HYDROLASE (DLH) BOUND WITH THE PMS MOIETY OF THE PROTEASE INHIBITOR, PHENYLMETHYLSULFONYL FLUORIDE (PMSF)

Robinson, A., Edwards, K.J., Carr, P.D., Barton, J.D., Ewart, G.D., Ollis, D.L.

(2000) Acta Crystallogr D Biol Crystallogr 56: 1376-1384

Released	2000-12-13
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Pseudomonas putida
Macromolecule	DIENELACTONE HYDROLASE (protein)

Explore in 3D

1GH7 \| pdb_00001gh7	Download File View File

CRYSTAL STRUCTURE OF THE COMPLETE EXTRACELLULAR DOMAIN OF THE BETA-COMMON RECEPTOR OF IL-3, IL-5, AND GM-CSF

Carr, P.D., Gustin, S.E., Church, A.P., Murphy, J.M., Ford, S.C., Mann, D.A., Woltring, D.M., Walker, I., Ollis, D.L., Young, I.G.

(2001) Cell 104: 291-300

Released	2001-11-28
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	CYTOKINE RECEPTOR COMMON BETA CHAIN (protein)
Unique branched monosaccharides	BMA, FUC, NAG

Explore in 3D

1GNK \| pdb_00001gnk	Download File View File

GLNK, A SIGNAL PROTEIN FROM E. COLI

Xu, Y., Cheah, E., Carr, P.D., Vanheeswijk, W.C., Westerhoff, H.V., Vasudevan, S.G., Ollis, D.L.

(1998) J Mol Biology 282: 149-165

Released	1999-07-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN (GLNK) (protein)
Unique Ligands	SO4

Explore in 3D

1GTK \| pdb_00001gtk	Download File View File

Time-resolved and static-ensemble structural chemistry of hydroxymethylbilane synthase

Helliwell, J.R., Nieh, Y.P., Raftery, J., Cassetta, A., Habash, J., Carr, P.D., Ursby, T., Wulff, M., Thompson, A.W., Niemann, A.C., Haedener, A.

(2003) Faraday Discuss 122: 131

Released	2003-01-16
Method	X-RAY DIFFRACTION 1.66 Å
Organisms	Escherichia coli
Macromolecule	PORPHOBILINOGEN DEAMINASE (protein)
Unique Ligands	DPM

Explore in 3D

1J53 \| pdb_00001j53	Download File View File

Structure of the N-terminal Exonuclease Domain of the Epsilon Subunit of E.coli DNA Polymerase III at pH 8.5

Hamdan, S., Carr, P.D., Brown, S.E., Ollis, D.L., Dixon, N.E.

(2002) Structure 10: 535-546

Released	2002-10-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli
Macromolecule	DNA polymerase III, epsilon chain (protein)
Unique Ligands	EDO, MN, TMP

Explore in 3D

1J54 \| pdb_00001j54	Download File View File

Structure of the N-terminal exonuclease domain of the epsilon subunit of E.coli DNA polymerase III at pH 5.8

Hamdan, S., Carr, P.D., Brown, S.E., Ollis, D.L., Dixon, N.E.

(2002) Structure 10: 535-546

Released	2002-10-16
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli
Macromolecule	DNA polymerase III, epsilon chain (protein)
Unique Ligands	EDO, MN, TMP

Explore in 3D

1PIL \| pdb_00001pil	Download File View File

STRUCTURE OF THE ESCHERICHIA COLI SIGNAL TRANSDUCING PROTEIN PII

Ollis, D.L., Cheah, U.E., Carr, P.D., Suffolk, P.M.

(1994) Structure 2: 981-990

Released	1995-08-04
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Escherichia coli
Macromolecule	SIGNAL TRANSDUCING PROTEIN P2 (protein)

Explore in 3D

1QY7 \| pdb_00001qy7	Download File View File

The structure of the PII protein from the cyanobacteria Synechococcus sp. PCC 7942

Xu, Y., Carr, P.D., Clancy, P., Garcia-Dominguez, M., Forchhammer, K., Florencio, F., Tandeau de Marsac, N., Vasudevan, S.G., Ollis, D.L.

(2003) Acta Crystallogr D Biol Crystallogr 59: 2183-2190

Released	2003-09-23
Method	X-RAY DIFFRACTION 2 Å
Organisms	Synechococcus elongatus PCC 7942 = FACHB-805
Macromolecule	Nitrogen regulatory protein P-II (protein)
Unique Ligands	NI, SO4

Explore in 3D

1UL3 \| pdb_00001ul3	Download File View File

Crystal Structure of PII from Synechocystis sp. PCC 6803

Xu, Y., Carr, P.D., Clancy, P., Garcia-Dominguez, M., Forchhammer, K., Florencio, F., Tandeau de Marsac, N., Vasudevan, S.G., Ollis, D.L.

(2003) Acta Crystallogr D Biol Crystallogr 59: 2183-2190

Released	2003-12-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Synechocystis sp.
Macromolecule	Nitrogen regulatory protein P-II (protein)
Unique Ligands	CA, GOL

Explore in 3D

1V4A \| pdb_00001v4a	Download File View File

Structure of the N-terminal Domain of Escherichia coli Glutamine Synthetase adenylyltransferase

Xu, Y., Zhang, R., Joachimiak, A., Carr, P.D., Ollis, D.L., Vasudevan, S.G.

(2004) Structure 12: 861-869

Released	2004-07-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	Glutamate-ammonia-ligase adenylyltransferase (protein)

Explore in 3D

1YPN \| pdb_00001ypn	Download File View File

REDUCED FORM HYDROXYMETHYLBILANE SYNTHASE (K59Q MUTANT) CRYSTAL STRUCTURE AFTER 2 HOURS IN A FLOW CELL DETERMINED BY TIME-RESOLVED LAUE DIFFRACTION

Helliwell, J.R., Nieh, Y.P., Raftery, J., Cassetta, A., Habash, J., Carr, P.D., Ursby, T., Wulff, M., Thompson, A.W., Niemann, A.C., Haedener, A.

(1998) J Chem Soc Faraday Trans 94: 2615-2622

Released	1999-03-02
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	HYDROXYMETHYLBILANE SYNTHASE (protein)
Unique Ligands	DPM

Explore in 3D

1ZI6 \| pdb_00001zi6	Download File View File

Crystal Structure Analysis of the dienelactone hydrolase (C123S) mutant- 1.7 A

Kim, H.-K., Liu, J.-W., Carr, P.D., Ollis, D.L.

(2005) Acta Crystallogr D Biol Crystallogr 61: 920-931

Released	2005-07-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Pseudomonas putida
Macromolecule	Carboxymethylenebutenolidase (protein)
Unique Ligands	GOL, SO4

Explore in 3D

1ZI8 \| pdb_00001zi8	Download File View File

Crystal Structure Analysis of the dienelactone hydrolase mutant(E36D, C123S, A134S, S208G, A229V, K234R)- 1.4 A

Kim, H.-K., Liu, J.-W., Carr, P.D., Ollis, D.L.

(2005) Acta Crystallogr D Biol Crystallogr 61: 920-931

Released	2005-07-05
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Pseudomonas putida
Macromolecule	Carboxymethylenebutenolidase (protein)
Unique Ligands	GOL, SO4

Explore in 3D

1ZI9 \| pdb_00001zi9	Download File View File

Crystal Structure Analysis of the dienelactone hydrolase (E36D, C123S) mutant- 1.5 A

Kim, H.-K., Liu, J.-W., Carr, P.D., Ollis, D.L.

(2005) Acta Crystallogr D Biol Crystallogr 61: 920-931

Released	2005-07-05
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Pseudomonas putida
Macromolecule	Carboxymethylenebutenolidase (protein)
Unique Ligands	GOL, SO4

Explore in 3D

1ZIC \| pdb_00001zic	Download File View File

Crystal Structure Analysis of the dienelactone hydrolase (C123S, R206A) mutant- 1.7 A

Kim, H.-K., Liu, J.-W., Carr, P.D., Ollis, D.L.

(2005) Acta Crystallogr D Biol Crystallogr 61: 920-931

Released	2005-07-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Pseudomonas putida
Macromolecule	Carboxymethylenebutenolidase (protein)
Unique Ligands	GOL, SO4

Explore in 3D

1ZIX \| pdb_00001zix	Download File View File

Crystal Structure Analysis of the dienelactone hydrolase mutant (E36D, R105H, C123S, G211D, K234N)- 1.8 A

Kim, H.-K., Liu, J.-W., Carr, P.D., Ollis, D.L.

(2005) Acta Crystallogr D Biol Crystallogr 61: 920-931

Released	2005-07-05
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Pseudomonas putida
Macromolecule	Carboxymethylenebutenolidase (protein)
Unique Ligands	GOL

Explore in 3D

1ZIY \| pdb_00001ziy	Download File View File

Crystal Structure Analysis of the dienelactone hydrolase mutant (C123S) bound with the PMS moiety of the protease inhibitor, Phenylmethylsulfonyl fluoride (PMSF)- 1.9 A

Kim, H.-K., Liu, J.-W., Carr, P.D., Ollis, D.L.

(2005) Acta Crystallogr D Biol Crystallogr 61: 920-931

Released	2005-07-05
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pseudomonas putida
Macromolecule	Carboxymethylenebutenolidase (protein)
Unique Ligands	GOL, SO4

Explore in 3D

1ZJ4 \| pdb_00001zj4	Download File View File

Crystal Structure Analysis of the dienelactone hydrolase mutant (E36D, C123S) bound with the PMS moiety of the protease inhibitor, Phenylmethylsulfonyl fluoride (PMSF)- 1.7 A

Kim, H.-K., Liu, J.-W., Carr, P.D., Ollis, D.L.

(2005) Acta Crystallogr D Biol Crystallogr 61: 920-931

Released	2005-07-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Pseudomonas putida
Macromolecule	Carboxymethylenebutenolidase (protein)
Unique Ligands	GOL, SO4

Explore in 3D

1ZJ5 \| pdb_00001zj5	Download File View File

Crystal Structure Analysis of the dienelactone hydrolase mutant (E36D, C123S, A134S, S208G, A229V, K234R) bound with the PMS moiety of the protease inhibitor, Phenylmethylsulfonyl fluoride (PMSF)- 1.7 A

Kim, H.-K., Liu, J.-W., Carr, P.D., Ollis, D.L.

(2005) Acta Crystallogr D Biol Crystallogr 61: 920-931

Released	2005-07-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Pseudomonas putida
Macromolecule	Carboxymethylenebutenolidase (protein)
Unique Ligands	GOL, SO4

Explore in 3D

2D2G \| pdb_00002d2g	Download File View File

OpdA from Agrobacterium radiobacter with bound product dimethylthiophosphate

Jackson, C., Kim, H.K., Carr, P.D., Liu, J.W., Ollis, D.L.

(2005) Biochim Biophys Acta 1752: 56-64

Released	2005-09-20
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Agrobacterium tumefaciens
Macromolecule	phosphotriesterase (protein)
Unique Ligands	CO, DZZ

Explore in 3D

2D2H \| pdb_00002d2h	Download File View File

OpdA from Agrobacterium radiobacter with bound inhibitor trimethyl phosphate at 1.8 A resolution

Jackson, C., Kim, H.K., Carr, P.D., Liu, J.W., Ollis, D.L.

(2005) Biochim Biophys Acta 1752: 56-64

Released	2005-09-20
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Agrobacterium tumefaciens
Macromolecule	phosphotriesterase (protein)
Unique Ligands	CO, TZZ

Explore in 3D

2D2J \| pdb_00002d2j	Download File View File

OpdA from Agrobacterium radiobacter without inhibitor/product present at 1.75 A resolution

Jackson, C., Kim, H.K., Carr, P.D., Liu, J.W., Ollis, D.L.

(2005) Biochim Biophys Acta 1752: 56-64

Released	2005-09-20
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Agrobacterium tumefaciens
Macromolecule	phosphotriesterase (protein)
Unique Ligands	CO, EDO

Explore in 3D

2DXL \| pdb_00002dxl	Download File View File

Glycerophosphodiesterase from Enterobacter aerogenes

Jackson, C.J., Carr, P.D., Ollis, D.L.

(2007) J Mol Biology 367: 1047-1062

Released	2007-05-22
Method	X-RAY DIFFRACTION 3 Å
Organisms	Klebsiella aerogenes
Macromolecule	Phosphohydrolase (protein)
Unique Ligands	CO

1 to 25 of 111 Structures

Page 1 of 5

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1BIK | pdb_00001bik

1CIV | pdb_00001civ

1GGV | pdb_00001ggv

1GH7 | pdb_00001gh7

1GNK | pdb_00001gnk

1GTK | pdb_00001gtk

1J53 | pdb_00001j53

1J54 | pdb_00001j54

1PIL | pdb_00001pil

1QY7 | pdb_00001qy7

1UL3 | pdb_00001ul3

1V4A | pdb_00001v4a

1YPN | pdb_00001ypn

1ZI6 | pdb_00001zi6

1ZI8 | pdb_00001zi8

1ZI9 | pdb_00001zi9

1ZIC | pdb_00001zic

1ZIX | pdb_00001zix

1ZIY | pdb_00001ziy

1ZJ4 | pdb_00001zj4

1ZJ5 | pdb_00001zj5

2D2G | pdb_00002d2g

2D2H | pdb_00002d2h

2D2J | pdb_00002d2j

2DXL | pdb_00002dxl