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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Cheng, W.C."

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Search Summary

This query matches 33 Structures.

Refinements

Structure Determination Methodology

experimental (33)

Scientific Name of Source Organism

	Helicobacter pylori 26695 (15)
	Homo sapiens (9)
	Staphylococcus aureus subsp. aureus Mu50 (4)
	Helicobacter pylori (2)
	Mycobacterium tuberculosis H37Rv (2)
	Escherichia coli K-12 (1)

Taxonomy

	Bacteria (24)
	Eukaryota (9)

Experimental Method

X-RAY DIFFRACTION (33)

Polymer Entity Type

Protein (33)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (5)
	2.0 - 2.5 (20)
	2.5 - 3.0 (5)
	3.0 - 3.5 (1)
	3.5 - 4.0 (1)

Release Date

	2005 - 2009 (3)
	2010 - 2014 (21)
	2020 - 2024 (9)

Enzyme Classification Name

	Transferases (11)
	Hydrolases (10)
	Oxidoreductases (10)
	Lyases (3)

Membrane Protein Annotation

	PDBTM (5)
	MemProtMD (4)
	mpstruc (4)
	OPM (1)

Symmetry Type

	Asymmetric (21)
	Cyclic (13)

SCOP Classification

	Alpha and beta proteins (a/b) (16)
	Artifacts (1)

AllSelected

1 to 25 of 33 Structures

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1ZUH \| pdb_00001zuh	Download File View File

Structural Basis for Shikimate-binding Specificity of Helicobacter pylori Shikimate Kinase

Cheng, W.C., Chang, Y.N., Wang, W.C.

(2005) J Bacteriol 187: 8156-8163

Released	2006-05-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate kinase (protein)

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1ZUI \| pdb_00001zui	Download File View File

Structural Basis for Shikimate-binding Specificity of Helicobacter pylori Shikimate Kinase

Cheng, W.C., Chang, Y.N., Wang, W.C.

(2005) J Bacteriol 187: 8156-8163

Released	2006-05-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate kinase (protein)
Unique Ligands	PO4, SKM

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3CLH \| pdb_00003clh	Download File View File

Crystal structure of 3-dehydroquinate synthase (DHQS)from Helicobacter pylori

Wang, W.C., Liu, J.S., Cheng, W.C., Wang, H.J., Chen, Y.C.

(2008) Biochem Biophys Res Commun 373: 1-7

Released	2009-03-24
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Helicobacter pylori
Macromolecule	3-dehydroquinate synthase (protein)
Unique Ligands	NAD, ZN

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3HR7 \| pdb_00003hr7	Download File View File

Crystal structure of the shikimate kinase-sulfate complex from Helicobacter pylori

Cheng, W.C., Wang, W.C.

(2012) PLoS One 7: e33481-e33481

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate kinase (protein)
Unique Ligands	SO4

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3MRS \| pdb_00003mrs	Download File View File

Crystal structure of shikimate kinase mutant (R57A) from Helicobacter pylori

Cheng, W.C., Chen, T.J., Lin, S.C., Wang, W.C.

(2012) PLoS One 7: e33481-e33481

Released	2011-05-04
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate kinase (protein)

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3MUF \| pdb_00003muf	Download File View File

Shikimate kinase from Helicobacter pylori in complex with shikimate-3-phosphate and ADP

Cheng, W.C., Chen, T.J., Lin, S.C., Wang, W.C.

(2012) PLoS One 7: e33481-e33481

Released	2011-05-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Helicobacter pylori
Macromolecule	Shikimate kinase (protein)
Unique Ligands	ADP, S3P

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3N2E \| pdb_00003n2e	Download File View File

Crystal structure of Helicobactor pylori shikimate kinase in complex with NSC162535

Cheng, W.C., Chen, T.J., Lin, S.C., Wang, W.C.

(2012) PLoS One 7: e33481-e33481

Released	2011-05-18
Method	X-RAY DIFFRACTION 2.53 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate kinase (protein)
Unique Ligands	OSA, TLA

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3PHG \| pdb_00003phg	Download File View File

Crystal structure of the Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori

Cheng, W.C., Lin, S.C., Wang, W.C.

To be published

Released	2011-11-09
Method	X-RAY DIFFRACTION 1.57 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate dehydrogenase (protein)

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3PHH \| pdb_00003phh	Download File View File

Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate

Cheng, W.C., Lin, S.C., Wang, W.C.

To be published

Released	2011-11-09
Method	X-RAY DIFFRACTION 1.42 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate dehydrogenase (protein)
Unique Ligands	SKM

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3PHI \| pdb_00003phi	Download File View File

Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with Shikimate and NADPH

Cheng, W.C., Lin, S.C., Wang, W.C.

To be published

Released	2011-11-09
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate dehydrogenase (protein)
Unique Ligands	NDP, SKM

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3PHJ \| pdb_00003phj	Download File View File

Shikimate 5-Dehydrogenase (aroE) from Helicobacter pylori in complex with 3-Dehydroshikimate

Cheng, W.C., Lin, S.C., Lin, C.H., Wang, W.C.

To be published

Released	2011-11-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate dehydrogenase (protein)
Unique Ligands	DHK

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3QBD \| pdb_00003qbd	Download File View File

3-Dehydroquinate Synthase (aroB) from Mycobacterium tuberculosis in complex with NAD

Cheng, W.C., Chen, T.J., Wang, W.C.

To be published

Released	2012-01-18
Method	X-RAY DIFFRACTION 2.47 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	3-dehydroquinate synthase (protein)
Unique Ligands	NAD

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3QBE \| pdb_00003qbe	Download File View File

Crystal structure of the 3-Dehydroquinate Synthase (aroB) from Mycobacterium tuberculosis

Cheng, W.C., Wen, Y.H., Wang, W.C.

To be published

Released	2012-01-18
Method	X-RAY DIFFRACTION 2.07 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	3-dehydroquinate synthase (protein)
Unique Ligands	CL, ZN

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3VMA \| pdb_00003vma	Download File View File

Crystal Structure of the Full-Length Transglycosylase PBP1b from Escherichia coli

Huang, C.Y., Sung, M.T., Lai, Y.T., Chou, L.Y., Shih, H.W., Cheng, W.C., Wong, C.H., Ma, C.

(2009) Proc Natl Acad Sci U S A 106: 8824-8829

Released	2012-03-14
Method	X-RAY DIFFRACTION 2.161 Å
Organisms	Escherichia coli K-12
Macromolecule	Penicillin-binding protein 1B (protein)
Unique Ligands	M0E

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3VMQ \| pdb_00003vmq	Download File View File

Crystal structure of Staphylococcus aureus membrane-bound transglycosylase: Apoenzyme

Huang, C.Y., Shih, H.W., Lin, L.Y., Tien, Y.W., Cheng, T.J.R., Cheng, W.C., Wong, C.H., Ma, C.

(2012) Proc Natl Acad Sci U S A 109: 6496-6501

Released	2012-04-18
Method	X-RAY DIFFRACTION 2.518 Å
Organisms	Staphylococcus aureus subsp. aureus Mu50
Macromolecule	Monofunctional glycosyltransferase (protein)
Unique Ligands	MG

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3VMR \| pdb_00003vmr	Download File View File

Crystal structure of Staphylococcus aureus membrane-bound transglycosylase in complex with moenomycin

Huang, C.Y., Shih, H.W., Lin, L.Y., Tien, Y.W., Cheng, T.J.R., Cheng, W.C., Wong, C.H., Ma, C.

(2012) Proc Natl Acad Sci U S A 109: 6496-6501

Released	2012-04-18
Method	X-RAY DIFFRACTION 3.688 Å
Organisms	Staphylococcus aureus subsp. aureus Mu50
Macromolecule	Monofunctional glycosyltransferase (protein)
Unique Ligands	M0E

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3VMS \| pdb_00003vms	Download File View File

Crystal structure of Staphylococcus aureus membrane-bound transglycosylase in complex with NBD-Lipid II

Huang, C.Y., Shih, H.W., Lin, L.Y., Tien, Y.W., Cheng, T.J.R., Cheng, W.C., Wong, C.H., Ma, C.

(2012) Proc Natl Acad Sci U S A 109: 6496-6501

Released	2012-04-18
Method	X-RAY DIFFRACTION 3.202 Å
Organisms	Staphylococcus aureus subsp. aureus Mu50
Macromolecule	Monofunctional glycosyltransferase (protein)

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3VMT \| pdb_00003vmt	Download File View File

Crystal structure of Staphylococcus aureus membrane-bound transglycosylase in complex with a Lipid II analog

Huang, C.Y., Shih, H.W., Lin, L.Y., Tien, Y.W., Cheng, T.J.R., Cheng, W.C., Wong, C.H., Ma, C.

(2012) Proc Natl Acad Sci U S A 109: 6496-6501

Released	2012-04-18
Method	X-RAY DIFFRACTION 2.299 Å
Organisms	Staphylococcus aureus subsp. aureus Mu50
Macromolecule	Monofunctional glycosyltransferase (protein)
Unique Ligands	LHI, MG

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4FOO \| pdb_00004foo	Download File View File

Crystal Structure of Shikimate Dehydrogenase (aroE) Q237K Mutant from Helicobacter pylori

Cheng, W.C., Chen, T.J., Wang, W.C.

Released	2012-12-26
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate dehydrogenase (protein)

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4FOS \| pdb_00004fos	Download File View File

Crystal Structure of Shikimate Dehydrogenase (aroE) Q237A Mutant from Helicobacter pylori in Complex with Shikimate

Cheng, W.C., Chen, T.J., Wang, W.C.

Released	2012-12-26
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate dehydrogenase (protein)
Unique Ligands	SKM

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4FPX \| pdb_00004fpx	Download File View File

Crystal Structure of Shikimate Dehydrogenase (aroE) Q237N Mutant from Helicobacter pylori

Cheng, W.C., Chen, T.J., Wang, W.C.

Released	2012-12-26
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate dehydrogenase (protein)

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4FQ8 \| pdb_00004fq8	Download File View File

Crystal Structure of Shikimate Dehydrogenase (aroE) Y210A Mutant from Helicobacter pylori in Complex with Shikimate

Cheng, W.C., Chen, T.J., Wang, W.C.

Released	2012-12-26
Method	X-RAY DIFFRACTION 2.07 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate dehydrogenase (protein)
Unique Ligands	SKM

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4FR5 \| pdb_00004fr5	Download File View File

Crystal Structure of Shikimate Dehydrogenase (aroE) Y210S Mutant from Helicobacter pylori in Complex with Shikimate

Cheng, W.C., Chen, T.J., Wang, W.C.

Released	2012-12-26
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate dehydrogenase (protein)
Unique Ligands	SKM

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4FSH \| pdb_00004fsh	Download File View File

Crystal Structure of Shikimate Dehydrogenase (aroE) Clinical Variant v2356 from Helicobacter pylori in Complex with Shikimate

Cheng, W.C., Chen, T.J., Wang, W.C.

To be published

Released	2013-01-30
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Helicobacter pylori 26695
Macromolecule	Shikimate dehydrogenase (protein)
Unique Ligands	SKM

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8K7D \| pdb_00008k7d	Download File View File

Crystal structure of human lysosomal alpha-galactosidase A in complex with (2R,3R,4S,5R)-2-(aminomethyl)-5-(hydroxymethyl)pyrrolidine-3,4-diol

Li, H.Y., Huang, K.F., Ko, T.P., Cheng, W.C.

(2024) JACS Au 4: 908-918

Released	2024-04-10
Method	X-RAY DIFFRACTION 2.61 Å
Organisms	Homo sapiens
Macromolecule	Alpha-galactosidase A (protein)
Unique Ligands	NAG, SO4, VLN
Unique branched monosaccharides	BMA, MAN, NAG

1 to 25 of 33 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1ZUH | pdb_00001zuh

1ZUI | pdb_00001zui

3CLH | pdb_00003clh

3HR7 | pdb_00003hr7

3MRS | pdb_00003mrs

3MUF | pdb_00003muf

3N2E | pdb_00003n2e

3PHG | pdb_00003phg

3PHH | pdb_00003phh

3PHI | pdb_00003phi

3PHJ | pdb_00003phj

3QBD | pdb_00003qbd

3QBE | pdb_00003qbe

3VMA | pdb_00003vma

3VMQ | pdb_00003vmq

3VMR | pdb_00003vmr

3VMS | pdb_00003vms

3VMT | pdb_00003vmt

4FOO | pdb_00004foo

4FOS | pdb_00004fos

4FPX | pdb_00004fpx

4FQ8 | pdb_00004fq8

4FR5 | pdb_00004fr5

4FSH | pdb_00004fsh

8K7D | pdb_00008k7d