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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Duax, W.L."

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Search Summary

This query matches 17 Structures.

Refinements

Structure Determination Methodology

experimental (17)

Scientific Name of Source Organism

	Brevibacillus brevis (8)
	Bos taurus (2)
	Pseudomonas aeruginosa PAO1 (2)
	Escherichia coli (1)
	Mus musculus (1)
	Mycosarcoma maydis (1)
	Saccharomyces cerevisiae (1)
	Streptomyces exfoliatus (1)

Taxonomy

	Bacteria (12)
	Eukaryota (5)

Experimental Method

X-RAY DIFFRACTION (17)

Polymer Entity Type

Protein (17)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (5)
	1.5 - 2.0 (2)
	2.0 - 2.5 (4)
	2.5 - 3.0 (4)

Release Date

	1980 - 1984 (1)
	1990 - 1994 (1)
	1995 - 1999 (6)
	2000 - 2004 (2)
	2005 - 2009 (3)
	2010 - 2014 (4)

Enzyme Classification Name

	Oxidoreductases (3)
	Hydrolases (1)

Symmetry Type

	Cyclic (9)
	Dihedral (6)
	Asymmetric (4)

SCOP Classification

	Alpha and beta proteins (a/b) (5)
	Peptides (5)
	All beta proteins (2)
	Artifacts (1)
	Small proteins (1)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 17 of 17 Structures

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1AL4 \| pdb_00001al4	Download File View File

GRAMICIDIN D FROM BACILLUS BREVIS (N-PROPANOL SOLVATE)

Burkhart, B.M., Gassman, R.M., Pangborn, W.A., Duax, W.L.

(1998) Biophys J 75: 2135

Released	1998-03-04
Method	X-RAY DIFFRACTION 1.13 Å
Organisms	Brevibacillus brevis
Macromolecule	GRAMICIDIN D (protein)
Unique Ligands	POL

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1ALX \| pdb_00001alx	Download File View File

GRAMICIDIN D FROM BACILLUS BREVIS (METHANOL SOLVATE)

Burkhart, B.M., Langs, D.A., Smith, G.D., Courseille, C., Precigoux, G., Hospital, M., Pangborn, W.A., Duax, W.L.

(1998) Biophys J 75: 2135

Released	1998-03-04
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Brevibacillus brevis
Macromolecule	GRAMICIDIN A (protein)
Unique Ligands	MOH

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1ALZ \| pdb_00001alz	Download File View File

GRAMICIDIN D FROM BACILLUS BREVIS (ETHANOL SOLVATE)

Burkhart, B.M., Pangborn, W.A., Duax, W.L., Langs, D.A.

(1998) Biophys J 75: 2135

Released	1998-03-04
Method	X-RAY DIFFRACTION 0.86 Å
Organisms	Brevibacillus brevis
Macromolecule	ILE-GRAMICIDIN C (protein) VAL-GRAMICIDIN A (protein)
Unique Ligands	EOH

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1AV2 \| pdb_00001av2	Download File View File

Gramicidin A/CsCl complex, active as a dimer

Burkhart, B.M., Li, N., Langs, D.A., Duax, W.L.

(1998) Proc Natl Acad Sci U S A 95: 12950

Released	1998-07-01
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Brevibacillus brevis
Macromolecule	GRAMICIDIN A (protein)
Unique Ligands	CL, CS, MOH

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1BDW \| pdb_00001bdw	Download File View File

GRAMICIDIN D FROM BACILLUS BREVIS (ACTIVE FORM)

Burkhart, B.M., Pangborn, W.A., Duax, W.L.

(1998) Proc Natl Acad Sci U S A 95: 12950

Released	1998-10-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Brevibacillus brevis
Macromolecule	GRAMICIDIN A (protein)
Unique Ligands	ACY

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1EUF \| pdb_00001euf	Download File View File

BOVINE DUODENASE(NEW SERINE PROTEASE), CRYSTAL STRUCTURE

Pletnev, V.Z., Zamolodchikova, T.S., Pangborn, W.A., Duax, W.L.

(2000) Proteins 41: 8-16

Released	2001-04-14
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Bos taurus
Macromolecule	DUODENASE (protein)
Unique Ligands	NAG, PO4

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1F90 \| pdb_00001f90	Download File View File

FAB FRAGMENT OF MONOCLONAL ANTIBODY (LNKB-2) AGAINST HUMAN INTERLEUKIN-2 IN COMPLEX WITH ANTIGENIC PEPTIDE

Afonin, P.V., Fokin, A.V., Tsigannik, I.N., Mikhailova, I.Y., Onoprienko, L.V., Mikhaleva, I.I., Ivanov, V.T., Mareeva, T.Y., Nesmeyanov, V.A., Li, N., Duax, W.L., Pletnev, V.Z.

(2001) Protein Sci 10: 1514-1521

Released	2001-07-11
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Mus musculus
Macromolecule	ANTIGENIC NONAPEPTIDE (protein) FAB FRAGMENT OF MONOCLONAL ANTIBODY (protein)

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1KP6 \| pdb_00001kp6	Download File View File

USTILAGO MAYDIS KILLER TOXIN KP6 ALPHA-SUBUNIT

Li, N., Erman, M., Pangborn, W., Duax, W.L., Park, C.-M., Bruenn, J., Ghosh, D.

(1999) J Biological Chem 274: 20425-20431

Released	1999-07-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Mycosarcoma maydis
Macromolecule	PROTEIN (TOXIN) (protein)
Unique Ligands	SO4

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1W5U \| pdb_00001w5u	Download File View File

GRAMICIDIN D FROM BACILLUS BREVIS (ETHANOL SOLVATE)

Glowka, M.L., Olczak, A., Bojarska, J., Szczesio, M., Duax, W.L., Burkhart, B.M., Pangborn, W.A., Langs, D.A., Wawrzak, Z.

(2005) Acta Crystallogr D Biol Crystallogr 61: 433

Released	2005-09-15
Method	X-RAY DIFFRACTION 1.14 Å
Organisms	Brevibacillus brevis
Macromolecule	GRAMICIDIN D (protein)
Unique Ligands	CL, EOH, RB

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2FWM \| pdb_00002fwm	Download File View File

Crystal Structure of E. coli EntA, a 2,3-dihydrodihydroxy benzoate dehydrogenase

Gulick, A.M., Duax, W.L.

(2006) Acta Crystallogr D Biol Crystallogr 62: 734-740

Released	2006-06-27
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (protein)

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2HSD \| pdb_00002hsd	Download File View File

THE REFINED THREE-DIMENSIONAL STRUCTURE OF 3ALPHA,20BETA-HYDROXYSTEROID DEHYDROGENASE AND POSSIBLE ROLES OF THE RESIDUES CONSERVED IN SHORT-CHAIN DEHYDROGENASES

Ghosh, D., Duax, W.L.

(1994) Structure 2: 629-640

Released	1994-08-31
Method	X-RAY DIFFRACTION 2.64 Å
Organisms	Streptomyces exfoliatus
Macromolecule	3-ALPHA, 20 BETA-HYDROXYSTEROID DEHYDROGENASE (protein)
Unique Ligands	NAD

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2INS \| pdb_00002ins	Download File View File

THE STRUCTURE OF DES-PHE B1 BOVINE INSULIN

Smith, G.D., Duax, W.L., Dodson, E.J., Dodson, G.G., Degraaf, R.A.G., Reynolds, C.D.

(1982) Acta Crystallogr B 38: 3028

Released	1982-08-05
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bos taurus
Macromolecule	DES-PHE B1 INSULIN (CHAIN A) (protein) DES-PHE B1 INSULIN (CHAIN B) (protein)
Unique Ligands	ZN

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2IZQ \| pdb_00002izq	Download File View File

Gramicidin D complex with KI

Olczak, A., Glowka, M.L., Szczesio, M., Bojarska, J., Duax, W.L., Burkhart, B.M., Wawrzak, Z.

(2007) Acta Crystallogr D Biol Crystallogr 63: 319

Released	2007-01-23
Method	X-RAY DIFFRACTION 0.8 Å
Organisms	Brevibacillus brevis
Macromolecule	GRAMICIDIN D (protein)
Unique Ligands	IOD, K, MOH

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3L8L \| pdb_00003l8l	Download File View File

Gramicidin D complex with sodium iodide

Olczak, A., Glowka, M.L., Szczesio, M., Bojarska, J., Wawrzak, Z., Duax, W.L.

(2010) Acta Crystallogr D Biol Crystallogr 66: 874-880

Released	2010-07-28
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Brevibacillus brevis
Macromolecule	GRAMICIDIN D (protein)
Unique Ligands	IOD, MOH, NA

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3LF1 \| pdb_00003lf1	Download File View File

Apo structure of The Short Chain Oxidoreductase Q9HYA2 from Pseudomonas aeruginosa PAO1 Containing an Atypical Catalytic Center

Huether, R., Umland, T.C., Duax, W.L.

(2010) Protein Sci 19: 1097-1103

Released	2010-04-14
Method	X-RAY DIFFRACTION 2.315 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Short Chain Oxidoreductase Q9HYA2 (protein)
Unique Ligands	CL, MN

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3LF2 \| pdb_00003lf2	Download File View File

NADPH Bound Structure of the Short Chain Oxidoreductase Q9HYA2 from Pseudomonas aeruginosa PAO1 Containing an Atypical Catalytic Center

Huether, R., Umland, T.C., Duax, W.L.

(2010) Protein Sci 19: 1097-1103

Released	2010-04-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Short Chain OxidoReductase Q9HYA2 (protein)
Unique Ligands	CL, GOL, NDP, SO4

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3RKU \| pdb_00003rku	Download File View File

Substrate Fingerprint and the Structure of NADP+ Dependent Serine Dehydrogenase from Saccharomyces cerevisiae complexed with NADP+

Huether, R., Pacheco, C.M., Duax, W.L.

To be published

Released	2011-06-01
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Oxidoreductase YMR226C (protein)
Unique Ligands	NAP

1 to 17 of 17 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1AL4 | pdb_00001al4

GRAMICIDIN D FROM BACILLUS BREVIS (N-PROPANOL SOLVATE)

1ALX | pdb_00001alx

GRAMICIDIN D FROM BACILLUS BREVIS (METHANOL SOLVATE)

1ALZ | pdb_00001alz

GRAMICIDIN D FROM BACILLUS BREVIS (ETHANOL SOLVATE)

1AV2 | pdb_00001av2

Gramicidin A/CsCl complex, active as a dimer

1BDW | pdb_00001bdw

GRAMICIDIN D FROM BACILLUS BREVIS (ACTIVE FORM)

1EUF | pdb_00001euf

BOVINE DUODENASE(NEW SERINE PROTEASE), CRYSTAL STRUCTURE

1F90 | pdb_00001f90

FAB FRAGMENT OF MONOCLONAL ANTIBODY (LNKB-2) AGAINST HUMAN INTERLEUKIN-2 IN COMPLEX WITH ANTIGENIC PEPTIDE

1KP6 | pdb_00001kp6

USTILAGO MAYDIS KILLER TOXIN KP6 ALPHA-SUBUNIT

1W5U | pdb_00001w5u

GRAMICIDIN D FROM BACILLUS BREVIS (ETHANOL SOLVATE)

2FWM | pdb_00002fwm

Crystal Structure of E. coli EntA, a 2,3-dihydrodihydroxy benzoate dehydrogenase

2HSD | pdb_00002hsd

THE REFINED THREE-DIMENSIONAL STRUCTURE OF 3ALPHA,20BETA-HYDROXYSTEROID DEHYDROGENASE AND POSSIBLE ROLES OF THE RESIDUES CONSERVED IN SHORT-CHAIN DEHYDROGENASES

2INS | pdb_00002ins

THE STRUCTURE OF DES-PHE B1 BOVINE INSULIN

2IZQ | pdb_00002izq

Gramicidin D complex with KI

3L8L | pdb_00003l8l

Gramicidin D complex with sodium iodide

3LF1 | pdb_00003lf1

Apo structure of The Short Chain Oxidoreductase Q9HYA2 from Pseudomonas aeruginosa PAO1 Containing an Atypical Catalytic Center

3LF2 | pdb_00003lf2

NADPH Bound Structure of the Short Chain Oxidoreductase Q9HYA2 from Pseudomonas aeruginosa PAO1 Containing an Atypical Catalytic Center

3RKU | pdb_00003rku

Substrate Fingerprint and the Structure of NADP+ Dependent Serine Dehydrogenase from Saccharomyces cerevisiae complexed with NADP+

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AL4 | pdb_00001al4

1ALX | pdb_00001alx

1ALZ | pdb_00001alz

1AV2 | pdb_00001av2

1BDW | pdb_00001bdw

1EUF | pdb_00001euf

1F90 | pdb_00001f90

1KP6 | pdb_00001kp6

1W5U | pdb_00001w5u

2FWM | pdb_00002fwm

2HSD | pdb_00002hsd

2INS | pdb_00002ins

2IZQ | pdb_00002izq

3L8L | pdb_00003l8l

3LF1 | pdb_00003lf1

3LF2 | pdb_00003lf2

3RKU | pdb_00003rku